Variants that are different between the clown and control
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17 months ago
anasjamshed ▴ 140

I have 2 vcf files; one is Clown and the other one is Control. Which tool I can use to find that are different between the 2 samples? vcf-compare -H A.vcf.gz B.vcf.gz will work or not?

Difference VCF • 667 views
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17 months ago

bctools isec

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But i think bcftools isec will give common variants , not uncommon?

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