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7
votes
2
answers
1.9k
views
2
answers
How to get the histogram of a graph
gatb written 5.4 years ago by matthias.zytnicki • 10 • updated 5 months ago by Biostar ♦♦ 20
0
votes
1
answer
269
views
1
answer
Leon on ubuntu?
leon gatb written 12 months ago by hsojoodi374 • 0
20
votes
3
answers
2.6k
views
3
answers
Blog: Fast kmer reverse complement code using bit tricks
kmer reverse-complement gatb code blog written 6.3 years ago by Rayan Chikhi • 1.5k • updated 11 months ago by Zev.Kronenberg ♦ 11k
4
votes
1
answer
350
views
1
answer
GATB-core kmer couting
kmer-counting gatb-core gatb written 19 months ago by elebanjar • 10
3
votes
1
answer
569
views
1
answer
GATB buildNode giving errors
gatb written 2.6 years ago by cwright • 0 • updated 2.6 years ago by Rayan Chikhi • 1.5k
6
votes
1
answer
552
views
1
answer
DSK: readme and options
gatb written 2.6 years ago by sebastien.letort • 70 • updated 2.6 years ago by pierre.peterlongo • 860
3
votes
1
answer
739
views
1
answer
GATB - Read fasta files
gatb written 3.0 years ago by robi • 10 • updated 3.0 years ago by guillaume.rizk • 20
0
votes
1
answer
903
views
1
answer
GATB-minia-pipelne fails at bloocoo step
gatb written 3.4 years ago by Shyam • 130 • updated 3.2 years ago by _r_am ♦ 32k
0
votes
1
answer
948
views
1
answer
importing a GFA2 scaffold graph
gatb written 3.6 years ago by egoltsman • 0 • updated 3.2 years ago by Rayan Chikhi • 1.5k
2
votes
1
answer
781
views
1
answer
GATB - Multithreaded iteration of paired banks ?
multithreading gatb written 3.4 years ago by wfd • 0 • updated 3.2 years ago by Rayan Chikhi • 1.5k
3
votes
1
answer
809
views
1
answer
GATB - create or manipulate data of Sequence
gatb written 3.3 years ago by wfd • 0 • updated 3.3 years ago by pierre.peterlongo • 860
1
vote
1
answer
1.0k
views
1
answer
compiling gatb-core with external Boost and hdf5
conda bioconda packaging gatb cmake written 3.3 years ago by ilya_shl • 0 • updated 3.3 years ago by Rayan Chikhi • 1.5k
0
votes
1
answer
732
views
1
answer
Inserting k-mers into existing Graph with GATB
gatb written 3.4 years ago by TK • 0 • updated 3.4 years ago by pierre.peterlongo • 860
0
votes
0
answers
972
views
0
answers
Tool: new release for GATB, the Genome Analysis Toolbox with de-Bruijn graph
tools next-gen gatb written 3.9 years ago by patrick.durand • 140
0
votes
1
answer
989
views
1
answer
GATB Multithread always one core
gatb written 4.0 years ago by lys8918 • 0 • updated 3.9 years ago by Rayan Chikhi • 1.5k
0
votes
0
answers
823
views
0
answers
News: GATB-Core Library Tutorial - Making efficient NGS data analysis softwares
news next-gen tutorial gatb tool written 3.9 years ago by patrick.durand • 140
1
vote
0
answers
1.1k
views
0
answers
News: Workshop on making high-performance NGS data analysis softwares
software news next-gen gatb written 4.1 years ago by patrick.durand • 140
0
votes
0
answers
1.5k
views
0
answers
Tutorial: New GATB-Core Tutorial: learn the Genome Analysis Tool Box... online
tutorial next-gen gatb written 4.2 years ago by patrick.durand • 140
2
votes
1
answer
972
views
1
answer
Getting list of connected nodes to a node
gatb written 4.3 years ago by An7ar35 • 0 • updated 4.3 years ago by edrezen • 720
1
vote
0
answers
1.2k
views
0
answers
News: Making efficient NGS data analysis softwares - GATB-Core Library Tutorial
news next-gen tutorial gatb tool written 4.3 years ago by patrick.durand • 140 • updated 4.3 years ago by GenoMax ♦ 95k
4
votes
0
answers
1.1k
views
0
answers
Tool: MindTheGap new release !
mindthegap gatb tool written 4.6 years ago by claire.lemaitre • 100
2
votes
1
answer
976
views
1
answer
Illumina mate-pair reads with TakeABreak
gatb takeabreak written 4.6 years ago by vincenzo.bonnici • 0 • updated 4.6 years ago by claire.lemaitre • 100
0
votes
1
answer
1.3k
views
1
answer
Segmentation fault error while using GATB
gatb written 4.7 years ago by AriyurD • 0 • updated 4.6 years ago by Rayan Chikhi • 1.5k
7
votes
4
answers
2.1k
views
4
answers
Tool: DiscoSnp becomes DiscoSnp++
discosnp snp tool gatb indels written 6.0 years ago by pierre.peterlongo • 860 • updated 5.0 years ago by acros • 10
1
vote
0
answers
1.5k
views
0
answers
LEON producing truncated output
leon fastq gatb written 5.2 years ago by intipedroso • 10
0
votes
1
answer
1.2k
views
1
answer
process substitution input
dbgh5 gatb written 5.3 years ago by gmdc • 0 • updated 5.3 years ago by edrezen • 720
4
votes
2
answers
1.3k
views
2
answers
Kmer and rev-comp in separate nodes
gatb written 5.3 years ago by NA • 20 • updated 5.3 years ago by edrezen • 720
3
votes
2
answers
1.8k
views
2
answers
Effect of Read Length?
discosnp gatb written 5.4 years ago by jfontana317 • 0 • updated 5.4 years ago by pierre.peterlongo • 860
4
votes
1
answer
2.1k
views
1
answer
GATB de Bruijn graph
sequence gatb written 5.6 years ago by Rob ♦ 4.6k
4
votes
1
answer
1.3k
views
1
answer
GATB download links don't work
gatb written 5.6 years ago by guillaume.gautreau44 • 140 • updated 5.6 years ago by Rayan Chikhi • 1.5k
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