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<prev • 10,184 results • page 1 of 340 • next >
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DEseq2 logfold interpretation
deseq2 rna-seq written 1 hour ago by MAPK • 1.3k
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101
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Find primers for data downloaded from NCBI and nhptr
rna-seq written 9 days ago by valizad2 • 0
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101
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5', 3' SS and Intron retention read count using STAR out.tab
star rna-seq alternative splicing written 2 days ago by thindmarsmission • 0
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How to filter constitutive expression genes and tissue-specific expression genes from RNA-seq data?
gene rna-seq sequencing written 21 hours ago by chesterlee7246 • 0
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High FPKM values for bacterial genes
rna-seq written 15 months ago by Cacau • 410 • updated 22 hours ago by Biostar ♦♦ 20
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Stuck creating reference genome with STAR
genome rna-seq written 2.8 years ago by nash.claire • 300 • updated 1 day ago by valizad2 • 0
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STAR problem: EXITING because of INPUT ERROR: could not open genomeFastaFile:
alignment rna-seq written 1 day ago by valizad2 • 0
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training genemarkS to call proteins from virus genomes
annotation rna-seq genemark gene calling written 1 day ago by Guillermo D. Huerta • 10
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R code for Differential Gene Expression
rna-seq written 1 day ago by landrjos • 10 • updated 1 day ago by Istvan Albert ♦♦ 77k
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Gene Paralogs from GeneCards or Genes Like Me
gene rna-seq written 1 day ago by Chris_AI • 30
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How to convert RNA-seq data to microarray data as if it was microarray data
microarray rna-seq written 7 weeks ago by shuyong • 0 • updated 1 day ago by Biostar ♦♦ 20
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677
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7 follow
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News: Pan-Cancer Analysis of RNA Binding Proteins in ~7000 tumor samples
cancer driver rna-seq news tcga pan-cancer mutations written 9 months ago by lsp03yjh • 580
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110
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1
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Convert colorspace fastq to basespace fastq
rna-seq written 2 days ago by aflrios • 0
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109
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1
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How do I modify default ggplot2 axis?
rscript ggplot2 deseq2 rna-seq written 2 days ago by jaqx008 • 40 • updated 2 days ago by rjactonspsfcf • 70
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Using GenomicDataCommons R package to identify cases with both DNA methylation and gene expression data
R gdc rna-seq dna methylation written 2 days ago by rjactonspsfcf • 70
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1
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Quantifying repetitive elements in RNA-seqs
quantification repetitive elements rna-seq written 2 days ago by lkianmehr • 10 • updated 2 days ago by Martombo • 2.3k
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What to do with corrupted lane files
rna-seq lane written 2 days ago by pentium3-user • 20 • updated 2 days ago by genomax ♦ 57k
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44
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CIRCexplorer2 only looks for exonic circRNA
circexplorer circrna circular rna-seq written 2 days ago by t.blasco95 • 0
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74
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Merging fastq files
illumina fastq miseq merge rna-seq written 2 days ago by william.mcentegart • 0
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79
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HUGO and Ensembl ids
ensembl hugo rna-seq single cell written 3 days ago by rsafavi • 40 • updated 2 days ago by Emily_Ensembl ♦ 16k
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MiRbase context IDs
mirbase ensembl id context rna-seq written 2 days ago by GiusiG • 0 • updated 2 days ago by Emily_Ensembl ♦ 16k
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Genome-aligned RNA-Seq: one treatment showing high% of unmapped reads:too short
gc content mapping rna-seq low alignment written 2 days ago by Biogeek • 280
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2
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93
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fasta to fastq without quality scores
sequence next-gen rna-seq sequencing written 3 days ago by inayatkhan8185 • 0 • updated 2 days ago by ATpoint ♦ 8.1k
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41
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Orientation of PE reads a review of fr ff and rf meanings
rna-seq written 2 days ago by Juke-34 • 1.3k
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2
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654
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20 follow
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Tool: BioTuring Browser: Making single-cell sequencing data in published studies really accessible!
sc-rna rna single cell rna-seq tool written 23 days ago by sonpham • 550 • updated 2 days ago by Jennifer Pham • 230
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267
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7 follow
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Is it possible to analyze differentially expressed genes without sample replicates using DESeq2?
deseq2 rna-seq written 4 weeks ago by Sarath Kumar • 0 • updated 3 days ago by bloggerklik • 10
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82
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GFF file multiple features for 1 gene region, how to collapse into 1?
bedtools gff rna-seq written 3 days ago by YOUSEUFS • 10 • updated 3 days ago by Carambakaracho • 550
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110
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6 follow
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allele specific expression (ASE) reference ratio plot query
allele-specific expression rna-seq snp written 3 days ago by prasundutta87 • 250
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Genome and transcriptome analyses in yeast
snp rna-seq sequencing written 3 days ago by JJ • 360
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1
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RNA-Seq normalization using limma or DESeq2
normalization limma rna-seq dseq2 written 3 days ago by user56 • 0
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