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<prev • 10,178 results • page 1 of 340 • next >
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36
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Convert colorspace fastq to basespace fastq
rna-seq written 5 hours ago by aflrios • 0 • updated 3 hours ago by h.mon ♦ 20k
4
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1
answer
65
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1
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How do I modify default ggplot2 axis?
rscript ggplot2 deseq2 rna-seq written 8 hours ago by jaqx008 • 40 • updated 8 hours ago by rjactonspsfcf • 70
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56
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5', 3' ASS and Intron retention read count using STAR out.tab
star rna-seq alternative splicing written 14 hours ago by thindmarsmission • 0 • updated 12 hours ago by zx8754 ♦ 5.4k
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39
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Using GenomicDataCommons R package to identify cases with both DNA methylation and gene expression data
R gdc rna-seq dna methylation written 16 hours ago by rjactonspsfcf • 70
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1
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60
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1
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Quantifying repetitive elements in RNA-seqs
quantification repetitive elements rna-seq written 20 hours ago by lkianmehr • 10 • updated 16 hours ago by Martombo • 2.3k
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45
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What to do with corrupted lane files
rna-seq lane written 18 hours ago by pentium3-user • 20 • updated 17 hours ago by genomax ♦ 57k
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CIRCexplorer2 only looks for exonic circRNA
circexplorer circrna circular rna-seq written 18 hours ago by t.blasco95 • 0
3
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67
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Merging fastq files
illumina fastq miseq merge rna-seq written 19 hours ago by william.mcentegart • 0
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71
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HUGO and Ensembl ids
ensembl hugo rna-seq single cell written 1 day ago by rsafavi • 40 • updated 19 hours ago by Emily_Ensembl ♦ 16k
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1
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58
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1
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MiRbase context IDs
mirbase ensembl id context rna-seq written 20 hours ago by GiusiG • 0 • updated 19 hours ago by Emily_Ensembl ♦ 16k
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50
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Genome-aligned RNA-Seq: one treatment showing high% of unmapped reads:too short
gc content mapping rna-seq low alignment written 20 hours ago by Biogeek • 280
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2
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87
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2
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fasta to fastq without quality scores
sequence next-gen rna-seq sequencing written 1 day ago by inayatkhan8185 • 0 • updated 21 hours ago by ATpoint ♦ 8.0k
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36
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Orientation of PE reads a review of fr ff and rf meanings
rna-seq written 21 hours ago by Juke-34 • 1.3k
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2
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643
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20 follow
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Tool: BioTuring Browser: Making single-cell sequencing data in published studies really accessible!
sc-rna rna single cell rna-seq tool written 21 days ago by sonpham • 550 • updated 1 day ago by Jennifer Pham • 230
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3
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260
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7 follow
3
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Is it possible to analyze differentially expressed genes without sample replicates using DESeq2?
deseq2 rna-seq written 4 weeks ago by Sarath Kumar • 0 • updated 1 day ago by bloggerklik • 10
0
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1
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77
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1
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GFF file multiple features for 1 gene region, how to collapse into 1?
bedtools gff rna-seq written 1 day ago by YOUSEUFS • 10 • updated 1 day ago by Carambakaracho • 550
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107
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6 follow
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allele specific expression (ASE) reference ratio plot query
allele-specific expression rna-seq snp written 1 day ago by prasundutta87 • 250
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72
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0
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Genome and transcriptome analyses in yeast
snp rna-seq sequencing written 1 day ago by JJ • 360
3
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1
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110
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1
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RNA-Seq normalization using limma or DESeq2
normalization limma rna-seq dseq2 written 1 day ago by user56 • 0
7
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1
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134
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1
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Problem with extracting read counts from RNA seq file
software error featurecounts rna-seq rseqc written 2 days ago by popescuiofelia • 0 • updated 1 day ago by h.mon ♦ 20k
2
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2
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353
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HISAT2 HLA genotyping errors
genome software error rna-seq written 8 months ago by jgibbs • 20 • updated 1 day ago by okaMavuso • 0
1
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104
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Job: Bioinformatics Data Scientist and Postdoctoral Fellow - Xing lab @ CHOP
splicing job rna-seq written 1 day ago by Jeremy Leipzig ♦ 17k
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55
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Single molecule RNA-seq, without poly(A) screening.
rna-seq written 1 day ago by gauravvman • 0
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40
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monocle how to identify branches
monocle tool pseudotime rna-seq written 2 days ago by hsu • 0
14
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2
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11 follow
2
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samtools: error while loading shared libraries: libbz2.so.1.0: cannot open shared object file: No such file or directory
samtools rna-seq written 14 months ago by wschrein • 20 • updated 2 days ago by 1176423710 • 0
1
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98
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5 follow
0
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To fetch the reads which are being partially mapped to the genome
jvarkit hisat2 star rna-seq bowtie2 written 2 days ago by swadha • 20 • updated 2 days ago by genomax ♦ 57k
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1
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77
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1
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GC content analysis using EdgeR
rna-seq written 2 days ago by vhelizarraga • 0 • updated 2 days ago by h.mon ♦ 20k
2
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2
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149
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2
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Time-course RNA-seq analysis in Deseq2
R rna-seq written 2 days ago by Lisa • 310 • updated 2 days ago by Vitis • 1.6k
0
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1
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93
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1
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Infer direction of paired end data
rna-seq written 2 days ago by waqaskhokhar999 • 0 • updated 2 days ago by Istvan Albert ♦♦ 77k
2
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0
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121
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5 follow
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gene expression for cancer identification
gene rna-seq written 2 days ago by maryam.akram001 • 10
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