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<prev • 9,298 results • page 1 of 310 • next >
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What is the recent preference for RNA-seq read deposition perior to publication
sra fairsharing rna-seq repository written 58 minutes ago by Farbod • 3.1k
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1
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477
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1
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Sleuth PCA plots - how to change axis to percentage?
R sleuth pca kallisto rna-seq written 10 months ago by BioBing • 90 • updated 2 hours ago by bruce.moran • 410
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1
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37
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1
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Confused about merging RNA-seq lanes/runs
lanes merge samples runs rna-seq written 4 hours ago by YaGalbi • 1.3k • updated 3 hours ago by genomax ♦ 49k
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11
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14 follow
11
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Downsampling dataset with more than 60 million reads
next-gen rna-seq written 3.8 years ago by mike • 60 • updated 5 hours ago by haro • 220
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37
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1
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EdgeR generic design matrix
rna-seq edger written 8 hours ago by rfenouil • 0 • updated 5 hours ago by Devon Ryan ♦ 80k
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1
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43
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1
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conversion of GFF3 formate to BED format
rna-seq written 6 hours ago by blooming.daisy333 • 0 • updated 6 hours ago by finswimmer ♦ 2.7k
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28
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MapSplice2 manual unavailable
mapsplice2 alignment circrna rna-seq sequencing written 7 hours ago by Grouse • 0
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1
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52
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1
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RNA BULK SEG ANALYSIS
blog rna-seq written 8 hours ago by IMDAD_PBG • 0 • updated 7 hours ago by andrew.j.skelton73 ♦ 5.0k
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34
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Using wig2array from iSeeRNA
genome next-gen rna-seq written 10 hours ago by anu014 • 150
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67
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Please suggest an appropriate genome-guided transcriptome assembler
genome marker alignment rna-seq written 19 hours ago by seta • 980
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68
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News: GeNets: a unified web platform for network-based genomic analyses
pathways news visualization networks rna-seq written 22 hours ago by vchris_ngs • 4.5k • updated 21 hours ago by genomax ♦ 49k
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103
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Can we concatenate two fastq files from same sample but different runs
rna-seq sequencing written 22 hours ago by Payal • 30
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68
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FeatureCounts summarizing at exon level
featurecounts rna-seq exon written 1 day ago by yamar • 0
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count and compare microRNA expression value in RNA-Seq data on Galaxy
fastq galaxy rna-seq microrna dge written 1 day ago by lkianmehr • 0
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1
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251
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1
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How to extract unique paired end reads from a merged BAM file?
rna-seq written 7 weeks ago by bioinfo89 • 10 • updated 1 day ago by Vijay Lakhujani ♦ 2.5k
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57
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the track part of UCSC table browser
table browser gtf rna-seq ucsc written 1 day ago by mikysyc2016 • 10 • updated 1 day ago by Emily_Ensembl ♦ 15k
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43
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overrepresentation enrichment analysis WebGestalt
rna-seq written 1 day ago by BIOTECH.DEEPTI911 • 0
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54
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how samtools rmdup remove cut reads made more reads been drop( cut or uncut reads mapping ratio are similar)?
rna-seq written 1 day ago by siqizhao2018 • 0
2
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1
answer
520
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1
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HISAT2 rn6.gtf file
alignment rna-seq written 8 months ago by saj98 • 60 • updated 1 day ago by Biostar ♦♦ 20
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53
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Fusion gene detection in sam file
fusion rna-seq nanopore ont written 1 day ago by pennakiza • 10
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1
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546
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1
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how to get read density for the first 1000 nt of each transcript
sequence next-gen rna-seq written 23 months ago by Sara • 20 • updated 1 day ago by Devon Ryan ♦ 80k
2
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1
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73
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1
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reasons for htseq-count with zero features
htseq-count rna-seq written 1 day ago by shenwei1376 • 0 • updated 1 day ago by genomax ♦ 49k
6
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1
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103
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1
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How to manage self loops in gene coexpression network constructed from RNA-seq data
gene R cytoscape rna-seq written 2 days ago by aishu.jp • 10 • updated 1 day ago by zx8754 ♦ 4.5k
1
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1
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101
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1
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Stringtie output files
gtf stringtie rna-seq written 2 days ago by g.e.novakovsky • 0 • updated 2 days ago by Kevin Blighe ♦ 21k
9
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2
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146
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5 follow
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Applying a function to a matrix
R rna-seq written 2 days ago by Za • 40 • updated 2 days ago by Jean-Karim Heriche ♦ 15k
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1
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53
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1
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stringDB PPI network with Log fold change?
ppi string-db rna-seq written 2 days ago by abdurehmanb • 0 • updated 2 days ago by Jean-Karim Heriche ♦ 15k
1
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0
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119
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RNAseq error while running sem-calculate-expression
software error rna-seq sequencing written 8 weeks ago by shuksi1984 • 20 • updated 2 days ago by Biostar ♦♦ 20
16
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3
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231
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6 follow
3
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duplicate 'row.names' are not allowed
software error R rna-seq written 4 days ago by barrypraveen • 10 • updated 2 days ago by bruce.moran • 410
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136
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Problem with FASTA filtering
rna-seq written 3 days ago by Janey • 10 • updated 2 days ago by Ram ♦ 15k
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1
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71
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1
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MapSplice2 circRNA output
mapsplice circrna rna-seq sequencing written 4 days ago by Grouse • 0
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