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<prev • 8,858 results • page 1 of 296 • next >
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Transcriptomics and gKaKs pipeline
gkaks next-gen rna-seq transcriptome written 2 hours ago by machoi • 0
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79
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1
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Quantifying repetitive elements from RNA-seq (hisat2 or Salmon)
repetitive elements rna-seq written 21 hours ago by ywchen • 0 • updated 15 hours ago by Devon Ryan ♦ 78k
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Defining transcript direction from sequencing
rna-seq sequencing written 2 days ago by MarVi • 0
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68
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Different TCGA file IDs with same the Sample ID
tcga rna-seq written 1 day ago by ahadli.farid • 10
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68
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isolating sequence from a specific site of the genes
rna-seq written 1 day ago by alireza346 • 0
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cufflinks missing some annotations?
gtf rna-seq transcripts written 1 day ago by Sharon • 220
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69
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Low mapping percentage after mapping RNA-seq reads to a closely related species
genome alignment rna-seq written 1 day ago by unawaz • 0
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How to add tdtomato to mouse genome for RNA seq analysis
salmon rna-seq written 1 day ago by jevanveen • 0
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76
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1
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Trimming RNA-Seq Data
assembly next-gen rna-seq sequencing written 2 days ago by williamsbrian5064 • 40 • updated 2 days ago by genomax ♦ 46k
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Forum: How do you organize sequence data (FASTQs)?
forum rna-seq sequencing written 2 days ago by Daniel E Cook • 180 • updated 2 days ago by Eric Lim • 420
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How to normalize the bam files for RNA-Seq samples for visualization
normalization rna-seq visualize written 2 days ago by wangdp123 • 90 • updated 2 days ago by trausch • 900
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Plotting multiple signal files against a single genomic region
deeptools chip-seq rna-seq written 5 weeks ago by keller.mckowen • 10 • updated 2 days ago by Alex Reynolds ♦ 23k
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Need help in selecting the correct output file from miRDeep2?
mirbase mirdeep2 rna-seq mirna written 6 weeks ago by bioinforesearchquestions • 120
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News: Training in Advanced Transcriptomics (RNASeq) Analysis @ NIH, USA
news snps rna-seq training written 2 days ago by AABI • 90
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Code for DEG analysis using Ballgown
ballgown stattest ngs rna-seq written 5 weeks ago by ag1805x • 80 • updated 2 days ago by Vijay Lakhujani • 1.9k
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find overlapping sequences and report min start and max end positions
R next-gen sequence rna-seq written 2 days ago by onkarnath89 • 0 • updated 2 days ago by genomax ♦ 46k
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65
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Java Exception in Running Trimmomatic software
software error rna-seq written 2 days ago by modarzi • 0 • updated 2 days ago by genomax ♦ 46k
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News: Genomic Characterization of RNA-Binding Proteins in ~7000 TCGA tumor samples
news tcga pan-cancer rna-seq rna modification rbp written 12 weeks ago by lsp03yjh • 520
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143
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Alternative splicing analysis following kallisto?
kallisto rna-seq alternative splicing written 8 days ago by dina.hesham139 • 70 • updated 2 days ago by kristoffer.vittingseerup • 450
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what are gene ratio and bg ratio in differentially expressed gene enrichment analysis?
gene rna-seq sequencing written 2 days ago by tuf58502 • 0 • updated 2 days ago by kristoffer.vittingseerup • 450
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Gene ontology enrichment non model organism (doubts about the methods)
non-model organism enrichment go rna-seq written 2 days ago by pablo61991 • 40
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67
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unknown trimmer in trimmomatic software
rna-seq written 2 days ago by modarzi • 0 • updated 2 days ago by toralmanvar • 150
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85
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Problem with Tophat / Bowtie pipeline
software error R rna-seq written 2 days ago by tebb • 0 • updated 2 days ago by genomax ♦ 46k
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116
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1
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How to calculate distribution of mapped read over classes of RNA?
chip-seq rna-seq written 4 days ago by biplab • 40 • updated 3 days ago by Kevin Blighe ♦ 17k
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95
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RNAseq sva-seq drops number of DE genes?
R sva svaseq rna-seq written 3 days ago by brismiller • 10 • updated 3 days ago by Kevin Blighe ♦ 17k
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Dataset for Breast Cancer with subtypes based on IHC/FISH
rna-seq written 3 days ago by coolfunkleo • 0 • updated 3 days ago by Kevin Blighe ♦ 17k
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Processing GTEx RNA-Seq data using the TCGA bioinformatic pipeline
rna-seq written 3 days ago by smsinks • 0 • updated 3 days ago by genomax ♦ 46k
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76
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5 follow
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comparing mapping statistics on s. pombe alignment (Star vs. tophat)
tophat alignment rna-seq pombe star written 3 days ago by dho322 • 0 • updated 3 days ago by Michael Dondrup ♦ 43k
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Human genes correlation to Bacterial genes
gene R next-gen rna-seq written 3 days ago by saamar.rajput • 10
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how to find sequence of the new gene that find by using RNA-seq and bioinformatic tools cufflinks
rna-seq written 3 days ago by mra8187 • 20 • updated 3 days ago by genomax ♦ 46k
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