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<prev • 702 results • page 1 of 24 • next >
2
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1
answer
75
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1
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Download or subset pathogenic variants for a selected gene from ensembl
R ensembl written 4 days ago by victor.lorca.castellanos • 10 • updated 4 days ago by genomax ♦ 64k
1
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1
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1.3k
views
1
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Ensembl Database Fetch Sequence Problem
ensembl database written 5.4 years ago by roger770507 • 0 • updated 4 days ago by Biostar ♦♦ 20
15
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4
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1.5k
views
10 follow
4
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Mapping Ensembl Gene IDs with dot suffix
gene ensembl biomart bioconductor R written 12 months ago by mk • 90 • updated 8 days ago by zx8754 ♦ 6.8k
16
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3
answers
42k
views
9 follow
3
answers
Ensembl Ids To Gene Name Conversion
gene ensembl written 6.9 years ago by jill.mckay • 30 • updated 12 days ago by liangj • 0
5
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1
answer
103
views
1
answer
Error in biomart connection
R biomart ensembl written 13 days ago by shivangi.agarwal800 • 50
7
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2
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359
views
5 follow
2
answers
VEP output and stop gain mutation
ensembl vep stop gain written 4 months ago by seta • 1.1k • updated 13 days ago by zx8754 ♦ 6.8k
4
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1
answer
123
views
1
answer
How to combine count matrix with mouse gene information from Ensemble using Biomart in R
ensembl biomart rna-seq R written 20 days ago by lamia_203 • 30 • updated 13 days ago by zx8754 ♦ 6.8k
3
votes
1
answer
109
views
1
answer
Ensembl ID found on the site but not in downloaded flat file
genome ensembl uniprot entrez written 18 days ago by Chat-ra • 20 • updated 18 days ago by Devon Ryan ♦ 88k
4
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1
answer
128
views
1
answer
Unable to query specific ensembl ID through biomaRt (R) or mygene (Python)
gene symbols ensembl biomart ensembl id mygene written 21 days ago by JourneyToAbyss • 50
2
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1
answer
77
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1
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why does my biomaRt query return inconsistent dataset lists?
biomarrt ensembl R written 23 days ago by adam.faranda • 0 • updated 23 days ago by Mike Smith • 1.1k
2
votes
1
answer
113
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1
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Using the Correct Ensembl Organism Database in topGO in R
R bioconductor topgo ensembl written 23 days ago by miles.thorburn • 80 • updated 23 days ago by h.mon ♦ 24k
2
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3
answers
1.1k
views
3
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Trouble with BioMart Perl API installation
perl ensembl api biomart written 3.4 years ago by tlorin • 250 • updated 23 days ago by mcclintock • 10
0
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0
answers
138
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0
answers
Bio-DB-HTS installation and ensembl-vep
bio-db-hts vep ensembl written 25 days ago by felipead66 • 20 • updated 25 days ago by Emily_Ensembl ♦ 17k
5
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0
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170
views
0
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News: Bioinformatics internships with Google Summer of Code 2019
ensembl intern gsoc news written 25 days ago by Emily_Ensembl ♦ 17k
0
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0
answers
57
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0
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Singe cell identification library with Ensembl_ID:s
haplotypes ensembl gene_id library annotation written 25 days ago by chilifan • 60
2
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2
answers
178
views
2
answers
how to extract the genomic positions and chromosome number for a list of genes
genome bioinformatics biomart ensembl written 27 days ago by Star • 20 • updated 27 days ago by tiago211287 • 1.1k
6
votes
2
answers
148
views
2
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How can I download data from plants.ensembl.org using wget in biomart?
wget ensembl biomart written 6 weeks ago by utsafar • 20 • updated 5 weeks ago by Astrid_Ensembl • 220
7
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2
answers
201
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5 follow
2
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How to collect the phastCons and phyloP data from Ensembl
ensembl phastcons phylop written 6 weeks ago by wangdp123 • 140 • updated 6 weeks ago by Emily_Ensembl ♦ 17k
6
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1
answer
152
views
1
answer
News: Temporarily reduced functionality of Ensembl and Ensembl Genomes
ensembl news written 6 weeks ago by Ben_Ensembl • 950
3
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0
answers
175
views
0
answers
Difficulty Converting lncRNA gene symbol to Ensembl
agilent ensembl gene symbol microarray written 7 weeks ago by JourneyToAbyss • 50 • updated 7 weeks ago by geek_y ♦ 9.3k
1
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1
answer
115
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1
answer
Extract species tree from the Ensembl Compara database
ensembl database tree written 7 weeks ago by BlastedBadger • 70 • updated 7 weeks ago by Emily_Ensembl ♦ 17k
6
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2
answers
120
views
2
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Missing transcripts (ENST numbers) in gff3 files from the ENSEMBL ftp site
gff3 annotation transcript ids ensembl written 7 weeks ago by goldberg.jm • 80
1
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0
answers
228
views
0
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Converting HUGO ID to Entrez gene or Ensembl ID
ensembl gene id entrez written 8 weeks ago by skiesareforflying • 0
8
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2
answers
175
views
2
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Different filters for wheat in biomaRt package and website
ensembl biomart getbm written 8 weeks ago by sandeep.amberkar18 • 10 • updated 8 weeks ago by Mike Smith • 1.1k
5
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1
answer
2.0k
views
1
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Ensembl ID gene length GC content
ensembl rna-seq written 3.5 years ago by cwhitfield • 0 • updated 8 weeks ago by Biostar ♦♦ 20
3
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1
answer
136
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1
answer
Extract strand information from ENSEMBL
gene ensembl snp written 8 weeks ago by banerjeeshayantan • 80 • updated 8 weeks ago by Emily_Ensembl ♦ 17k
1
vote
1
answer
166
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1
answer
Conserv CSQ and output plugin
ensembl vep csq written 9 weeks ago by robertclerc • 0 • updated 9 weeks ago by Emily_Ensembl ♦ 17k
0
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1
answer
814
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1
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Peculiar orthologue quality divergence in Ensembl
ensembl gene prediction written 3.9 years ago by cdsouthan • 1.8k • updated 9 weeks ago by Biostar ♦♦ 20
3
votes
1
answer
152
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1
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ENSEMBL Gene IDs for Human Inflammation
ensembl inflammation gene ids written 10 weeks ago by Kevin.Y • 10 • updated 10 weeks ago by Emily_Ensembl ♦ 17k
1
vote
1
answer
138
views
1
answer
MySQL: Mapping GRCh38 coordinates to GRCh37 using ensembldb
ensembl mysql mapping assembly written 10 weeks ago by badredda • 70 • updated 10 weeks ago by Pierre Lindenbaum ♦ 118k
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