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<prev • 624 results • page 1 of 21 • next >
2
votes
2
answers
114
views
2
answers
GO annotation from EnsemblPlant and JGI
jgi ensembl go chlamydomonas written 8 days ago by ytlin610 • 10
2
votes
1
answer
54
views
1
answer
What does the transcript support level (TSL) from ensembl mean?
ensembl tsl annotation written 2 days ago by caggtaagtat • 290
0
votes
1
answer
1.4k
views
1
answer
Find all SNPs in linkage disequilibrium
ensembl snp ld written 2.6 years ago by johanne.hh • 0 • updated 4 days ago by Ram ♦ 17k
5
votes
1
answer
3.9k
views
1
answer
Gene ID mapping of Ensembl IDs
gene ensembl id rna-seq written 2.6 years ago by onspotproductions • 120 • updated 4 days ago by Ram ♦ 17k
6
votes
3
answers
168
views
6 follow
3
answers
Get gene names from ensembl ID or gene region
ensembl rna-seq python written 6 days ago by angrypigeon • 120 • updated 5 days ago by Alex Reynolds ♦ 25k
12
votes
3
answers
6.5k
views
5 follow
3
answers
Getting Genomic Sequences And Phastcons Scores Using Python From Ensembl/Ucsc?
ucsc python sequence biopython ensembl written 8.2 years ago by User 9996 • 770 • updated 9 days ago by Ram ♦ 17k
2
votes
1
answer
1.7k
views
1
answer
Ensembl Compara Perl Api Taxon->Classification Error
perl ensembl api bioperl written 8.4 years ago by Cassj • 1.3k • updated 12 days ago by Ram ♦ 17k
6
votes
2
answers
3.0k
views
2
answers
Failed To Connect To The Ensembl Mysql Database
ensembl mysql written 8.5 years ago by Fred Fleche ♦ 4.2k • updated 13 days ago by Ram ♦ 17k
3
votes
3
answers
2.4k
views
3
answers
Playing With Mysql/Ensembl (I): Mapping 'Gene' To 'Xref'
ensembl mysql written 8.5 years ago by Pierre Lindenbaum ♦ 112k • updated 13 days ago by Ram ♦ 17k
5
votes
1
answer
111
views
1
answer
Ensembl Transcript Id's to Gene Names for Rabbit (Oryctolagus cuniculus)
ensembl rna-seq rabbit written 21 days ago by rekren • 10 • updated 21 days ago by jared.andrews07 • 1.3k
18
votes
2
answers
190
views
5 follow
2
answers
Species not in Ensembl
ensembl written 23 days ago by Ruben • 20
2
votes
0
answers
125
views
0
answers
News: Free Ensembl browser workshop: Hinxton, Cambridge, UK, 17 October 2018
ensembl news course training workshop written 4 weeks ago by Astrid_Ensembl • 160
3
votes
0
answers
90
views
0
answers
News: Free online Ensembl course
online mooc news training webinar ensembl written 4 weeks ago by Emily_Ensembl ♦ 15k
3
votes
1
answer
100
views
1
answer
Why is HGVS notation not available for some variants?
hgvs ensembl vep written 5 weeks ago by jpuntomarcos • 10 • updated 5 weeks ago by Titus • 720
7
votes
1
answer
173
views
1
answer
What does "." mean in transcript ID?
ncbi ensembl transcript written 5 weeks ago by Jenny Han • 10 • updated 5 weeks ago by finswimmer ♦ 5.3k
2
votes
1
answer
128
views
1
answer
Does Bowtie2 index use haplotypes and patches? and is the reference genome of Bowtie2 from UCSC or ensembl?
haplotypes bowtie2 chip-seq scaffolds ensembl written 6 weeks ago by salamandra • 170 • updated 6 weeks ago by Devon Ryan ♦ 84k
2
votes
1
answer
148
views
1
answer
Retrieving sequences from Ensembl Archive
ensembl dna sequence ensembl archive written 8 weeks ago by biostR • 0 • updated 8 weeks ago by Emily_Ensembl ♦ 15k
4
votes
1
answer
159
views
1
answer
Why a gene name have more than one ensembl ID in gtf?
gtf ensembl written 8 weeks ago by walker • 10 • updated 8 weeks ago by Emily_Ensembl ♦ 15k
0
votes
0
answers
139
views
0
answers
Obtaining MHC peptide binding groove protein sequences
mhc ensembl imgt hla sequence written 9 weeks ago by krc3004 • 0
2
votes
1
answer
98
views
1
answer
Seqmonk has two CRCh38 human genome versions, which one is the major release?
genome assembly rna-seq ensembl written 10 weeks ago by salamandra • 170
8
votes
2
answers
259
views
5 follow
2
answers
problem in EnsemblID to gene symbol conversion in TCGA data
tcga read counts rna-seq ensembl written 11 weeks ago by nazaninhoseinkhan • 270 • updated 11 weeks ago by Erin_Ensembl • 90
0
votes
1
answer
161
views
1
answer
Ensembl biomaRt down
ensembl biomart written 11 weeks ago by sergio.artsc • 0 • updated 11 weeks ago by genomax ♦ 55k
3
votes
1
answer
227
views
1
answer
How can I add the specie associated name to ensembls ID in a fasta file (cds) ?
ensembl written 11 weeks ago by dtejadamartinez • 10 • updated 11 weeks ago by finswimmer ♦ 5.3k
4
votes
2
answers
215
views
2
answers
Find all rsid synonyms for a list of rsids
ensembl snps rsids written 12 weeks ago by Jab • 0 • updated 11 weeks ago by Mike Smith • 850
4
votes
2
answers
198
views
5 follow
2
answers
BigWig from ensembl assembly to UCSC session
ensembl bigwig ucsc written 12 weeks ago by Dataminer • 2.5k • updated 12 weeks ago by Devon Ryan ♦ 84k
1
vote
1
answer
945
views
1
answer
Retrieve upstream non-coding sequenses of genes from Ensembl or phytozome
gene ensembl phytozyme written 3.4 years ago by F • 3.1k • updated 3 months ago by zx8754 ♦ 4.9k
0
votes
0
answers
175
views
0
answers
Unknown Stringtie IDs produced when using Ensembl GTF
gtf ensembl stringtie rna-seq written 3 months ago by freuv • 20 • updated 3 months ago by Emily_Ensembl ♦ 15k
6
votes
1
answer
180
views
1
answer
Ensembl: Genes versus Transcripts
gene annotation ensembl written 3 months ago by nathaniel.schleif • 0 • updated 3 months ago by finswimmer ♦ 5.3k
3
votes
3
answers
509
views
5 follow
3
answers
Fasta file and GTF file for STAR alignment
ensembl star written 3 months ago by snp87 • 30 • updated 3 months ago by swbarnes2 ♦ 4.0k
3
votes
1
answer
189
views
1
answer
Ensembl API: How to get sequences by Gene ID for older Ensembl version?
ensembl api older version written 3 months ago by bi_Scholar • 0 • updated 3 months ago by Emily_Ensembl ♦ 15k
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