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1
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1
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122
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1
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Ensembl release 96 and 95
ensembl perl api dataset written 5 days ago by DanielC • 80
2
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1
answer
87
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1
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Why many ENSEMBL gene ID cannot be converted to Entrez ID using org.Hs.eg.db in R?
gene R entrez ensembl written 6 days ago by biock • 0
2
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1
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125
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1
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why does my biomaRt query return inconsistent dataset lists?
ensembl biomart R written 7 weeks ago by adam.faranda • 10
8
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1
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121
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1
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Ensembl gene annotation GRCh37.87
ensembl salmon rna-seq written 10 days ago by F • 3.4k • updated 10 days ago by genomax ♦ 65k
3
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2
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2.2k
views
2
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Getting all Ensembl protein lengths
ensembl biomart protein R written 3.7 years ago by Natasha Latysheva • 50 • updated 12 days ago by Shicheng Guo • 7.4k
2
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1
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85
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1
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Can I get the same annotation data that is in ensembl gene annotation sets through mysql?
gtf ensembl written 17 days ago by endrebak • 740 • updated 17 days ago by Emily_Ensembl ♦ 18k
3
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1
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91
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1
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How do I get ensembl genome sizes with mysql?
ensembl written 17 days ago by endrebak • 740 • updated 17 days ago by Emily_Ensembl ♦ 18k
1
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1
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76
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1
answer
query and export SNPs information from ensembl
maf ensembl snps written 23 days ago by landivincenzo • 0 • updated 23 days ago by Ben_Ensembl • 960
3
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1
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115
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1
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Download or subset pathogenic variants for a selected gene from ensembl
R ensembl written 4 weeks ago by victor.lorca.castellanos • 10 • updated 4 weeks ago by genomax ♦ 65k
1
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1
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1.4k
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1
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Ensembl Database Fetch Sequence Problem
ensembl database written 5.4 years ago by roger770507 • 0 • updated 4 weeks ago by Biostar ♦♦ 20
15
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4
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1.6k
views
10 follow
4
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Mapping Ensembl Gene IDs with dot suffix
gene ensembl biomart bioconductor R written 13 months ago by mk • 90 • updated 5 weeks ago by zx8754 ♦ 7.1k
16
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3
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42k
views
9 follow
3
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Ensembl Ids To Gene Name Conversion
gene ensembl written 6.9 years ago by jill.mckay • 30 • updated 5 weeks ago by liangj • 0
5
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1
answer
136
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1
answer
Error in biomart connection
R biomart ensembl written 5 weeks ago by shivangi.agarwal800 • 60
7
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2
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402
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5 follow
2
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VEP output and stop gain mutation
ensembl vep stop gain written 5 months ago by seta • 1.1k • updated 5 weeks ago by zx8754 ♦ 7.1k
4
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1
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165
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1
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How to combine count matrix with mouse gene information from Ensemble using Biomart in R
ensembl biomart rna-seq R written 6 weeks ago by lamia_203 • 30 • updated 5 weeks ago by zx8754 ♦ 7.1k
3
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1
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154
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1
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Ensembl ID found on the site but not in downloaded flat file
genome ensembl uniprot entrez written 6 weeks ago by Chat-ra • 20 • updated 6 weeks ago by Devon Ryan ♦ 89k
4
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1
answer
169
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1
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Unable to query specific ensembl ID through biomaRt (R) or mygene (Python)
gene symbols ensembl biomart ensembl id mygene written 6 weeks ago by JourneyToAbyss • 60
2
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1
answer
155
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1
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Using the Correct Ensembl Organism Database in topGO in R
R bioconductor topgo ensembl written 7 weeks ago by miles.thorburn • 80 • updated 7 weeks ago by h.mon ♦ 24k
2
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3
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1.1k
views
3
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Trouble with BioMart Perl API installation
perl ensembl api biomart written 3.4 years ago by tlorin • 250 • updated 7 weeks ago by mcclintock • 10
0
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0
answers
221
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0
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Bio-DB-HTS installation and ensembl-vep
bio-db-hts vep ensembl written 7 weeks ago by felipead66 • 30 • updated 7 weeks ago by Emily_Ensembl ♦ 18k
5
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0
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222
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0
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News: Bioinformatics internships with Google Summer of Code 2019
ensembl intern gsoc news written 7 weeks ago by Emily_Ensembl ♦ 18k
0
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0
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76
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0
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Singe cell identification library with Ensembl_ID:s
haplotypes ensembl gene_id library annotation written 7 weeks ago by chilifan • 70
2
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2
answers
220
views
2
answers
how to extract the genomic positions and chromosome number for a list of genes
genome bioinformatics biomart ensembl written 7 weeks ago by Star • 20 • updated 7 weeks ago by tiago211287 • 1.1k
6
votes
2
answers
169
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2
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How can I download data from plants.ensembl.org using wget in biomart?
wget ensembl biomart written 10 weeks ago by utsafar • 20 • updated 9 weeks ago by Astrid_Ensembl • 220
7
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2
answers
246
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5 follow
2
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How to collect the phastCons and phyloP data from Ensembl
ensembl phastcons phylop written 10 weeks ago by wangdp123 • 140 • updated 10 weeks ago by Emily_Ensembl ♦ 18k
6
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1
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173
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1
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News: Temporarily reduced functionality of Ensembl and Ensembl Genomes
ensembl news written 10 weeks ago by Ben_Ensembl • 960
3
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0
answers
200
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0
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Difficulty Converting lncRNA gene symbol to Ensembl
agilent ensembl gene symbol microarray written 10 weeks ago by JourneyToAbyss • 60 • updated 10 weeks ago by geek_y ♦ 9.4k
1
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1
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137
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1
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Extract species tree from the Ensembl Compara database
ensembl database tree written 11 weeks ago by BlastedBadger • 70 • updated 11 weeks ago by Emily_Ensembl ♦ 18k
6
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2
answers
144
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2
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Missing transcripts (ENST numbers) in gff3 files from the ENSEMBL ftp site
gff3 annotation transcript ids ensembl written 11 weeks ago by goldberg.jm • 80
1
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0
answers
308
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0
answers
Converting HUGO ID to Entrez gene or Ensembl ID
ensembl gene id entrez written 12 weeks ago by skiesareforflying • 0
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