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4
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1
answer
55
views
1
answer
What is the "-201", "-202", "-203", etc. suffix in Ensembl transcript names?
ensembl written 2 days ago by blazer9131 • 10 • updated 2 days ago by Emily_Ensembl ♦ 18k
1
vote
2
answers
1.4k
views
2
answers
Extract alignment blocks of a given region from MAF file having whole genome alignments
maf ensembl whole genome alignment ucsc written 23 months ago by urjaswita • 80 • updated 3 days ago by Zhenpeng Yu • 0
1
vote
1
answer
85
views
1
answer
Unable to access ensembl biomart archives via R
R biomart ensembl written 9 days ago by johntimcham • 0 • updated 7 days ago by Mike Smith • 1.3k
3
votes
0
answers
94
views
0
answers
How to retrieve VCF of C. elegans and D. melanogaster
vcf ensembl dbsnp eva written 11 days ago by Fadel • 20
2
votes
1
answer
175
views
1
answer
Blog: Your input into Ensembl's new design
ensembl survey blog web design written 9 weeks ago by Emily_Ensembl ♦ 18k
4
votes
1
answer
104
views
1
answer
Conversion between Ensembl identifiers and gene symbols obtained from different annotation files
identifier conversion ensembl gencode written 13 days ago by lu.ne • 70 • updated 13 days ago by Emily_Ensembl ♦ 18k
1
vote
0
answers
82
views
0
answers
Job: Project Leader - Model Organism Genomics, Ensembl
ensembl wormbase job genomics model organisms written 13 days ago by Emily_Ensembl ♦ 18k
0
votes
0
answers
90
views
0
answers
Duplicates in Biomart Query, Ensembl ID maps to multiple Entrez genes.
ncbi ensembl biomart written 13 days ago by adam.faranda • 10
3
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0
answers
101
views
0
answers
Forum: Plotting Ensembl gene name changes between versions
ensembl forum version R written 13 days ago by Corentin • 380
1
vote
1
answer
143
views
1
answer
Annotation Human genome transcripts, Transcript Support Level meaning
gene annotation transcripts ensembl written 4 weeks ago by MarVi • 0 • updated 4 weeks ago by Emily_Ensembl ♦ 18k
0
votes
0
answers
78
views
0
answers
StringTie --merge creates the same id for neighbouring genes
ensembl stringtie gene assembly written 4 weeks ago by marina.v.yurieva • 480
0
votes
1
answer
110
views
1
answer
ensembl - Gene ID - Transcript ID
genome ensembl transcriptome written 5 weeks ago by soleimani_homa • 0 • updated 5 weeks ago by Emily_Ensembl ♦ 18k
0
votes
0
answers
131
views
0
answers
ensembl VEP: gnomAD genome annotation <AF1>&<AF2>
annotation vep gnomad ensembl written 5 weeks ago by c.clarido • 50
4
votes
1
answer
174
views
1
answer
Retrieve GFF3 file from Ensembl
gene assembly genome ensembl written 6 weeks ago by jamesdong • 0
0
votes
1
answer
96
views
1
answer
How to check the expression of a gene using the sequence of that gene?
ensembl sequence lncrna rna-seq blat written 6 weeks ago by Biologist • 150 • updated 6 weeks ago by flogin • 150
1
vote
2
answers
120
views
2
answers
uniprot variant classification DB retireve
variant vep uniprot ensembl written 6 weeks ago by cocchi.e89 • 30 • updated 6 weeks ago by Elisabeth Gasteiger • 1.6k
0
votes
0
answers
124
views
0
answers
Job: Ensembl Web Back-end Project Leader
ensembl web job written 6 weeks ago by Emily_Ensembl ♦ 18k
1
vote
0
answers
107
views
0
answers
Job: Ensembl Regulation Developer
ensembl epigenetics epigenomics job written 6 weeks ago by Emily_Ensembl ♦ 18k
4
votes
2
answers
394
views
2
answers
Looking for human reference genome with ancestral SNP alleles
genome assembly hg38 snp ensembl written 8 months ago by Scott • 80 • updated 7 weeks ago by kevin.esoh • 0
4
votes
0
answers
169
views
0
answers
Job: Ensembl Outreach Officer
ensembl job training written 7 weeks ago by Emily_Ensembl ♦ 18k
1
vote
0
answers
130
views
0
answers
Job: Ensembl Production Software Developer
ensembl software developer production job written 7 weeks ago by Emily_Ensembl ♦ 18k
3
votes
2
answers
185
views
2
answers
Get Ensembl mapping between the chromosome and scaffold names
ensembl scaffold assembly chromosome written 8 weeks ago by rubic • 180 • updated 8 weeks ago by crisime • 190
0
votes
1
answer
146
views
1
answer
ensembl mysql servers and helpdesk non-responsive. Is it me?
ensembl mysql written 9 weeks ago by Malcolm.Cook • 1.1k • updated 9 weeks ago by Emily_Ensembl ♦ 18k
3
votes
1
answer
125
views
1
answer
Retrieving Species names using Ensembl transcript id using command line
gene ensembl transcripts written 9 weeks ago by lokdeep17 • 0 • updated 9 weeks ago by Emily_Ensembl ♦ 18k
1
vote
1
answer
129
views
1
answer
Ensembl Biomart overlap QTL regions and genes
genome ensembl biomart written 10 weeks ago by Wietje • 200 • updated 10 weeks ago by Emily_Ensembl ♦ 18k
0
votes
0
answers
226
views
0
answers
patients hg19 VEP Fasta and CACHE GRCh37
ensembl grch37 vep hg19 written 4 months ago by cocchi.e89 • 30 • updated 10 weeks ago by Biostar ♦♦ 20
2
votes
0
answers
130
views
0
answers
Bulk Download all CDS and UTRs of known genes from ENSEMBL
cds utr ensembl written 11 weeks ago by Aishwarya Kulkarni • 60 • updated 11 weeks ago by ATpoint ♦ 21k
4
votes
1
answer
140
views
1
answer
How do I get the reference allele from this Ensembl variation endpoint?
ensembl written 11 weeks ago by Jeremy Leipzig ♦ 18k
4
votes
0
answers
186
views
0
answers
Download ONLY primary transcripts from plants
ncbi plant phytozome primary transcripts ensembl written 3 months ago by aboutmb • 0 • updated 3 months ago by Biostar ♦♦ 20
1
vote
2
answers
221
views
2
answers
How to select only protein coding mRNAs from a really long list of ENSG IDS
ensg ensembl rna ids written 3 months ago by brett.vanderwerff • 130
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