Showing: grepreset
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9
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4
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300
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6 follow
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GREP: out of memory
.gff heloci grep deseq2 mac os written 16 days ago by jaqx00830 • updated 11 days ago by Alex Reynolds24k
6
votes
1
answer
121
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1
answer
Remove hypothetical proteins
fasta grep script written 16 days ago by biodano.geo0 • updated 13 days ago by Ram16k
3
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1
answer
469
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1
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Sorting samtools output by flag or grepping its tags
flag grep samtools chimeric written 11 months ago by BPors30 • updated 25 days ago by Biostar ♦♦ 20
1
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0
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222
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5 follow
0
answers
4
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1
answer
174
views
1
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Selecting intergenic regions
grep shell file-handling written 6 weeks ago by vinayjrao100 • updated 6 weeks ago by M2015701160
5
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4
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176
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8 follow
4
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Extract fasta sequences from a file using a list in another file.
fasta grep header extract awk written 6 weeks ago by EBP910 • updated 6 weeks ago by cpad01127.7k
3
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1
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2.5k
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1
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Change fasta header sequence ID's
fasta grep oneliner written 3.9 years ago by thhaverk0 • updated 10 weeks ago by Biostar ♦♦ 20
3
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1
answer
159
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1
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arranging columns and rows
grep awk bash written 3 months ago by Ambika20 • updated 3 months ago by Pierre Lindenbaum110k
0
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2
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216
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5 follow
2
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Extracting counts of reads into a matrix
reads grep counts unix written 3 months ago by rmash0 • updated 3 months ago by cpad01127.7k
2
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1
answer
233
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1
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how to extract/grep lines containing specific word?
grep sed awk written 4 months ago by arsilan32460 • updated 4 months ago by Kevin Blighe24k
7
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3
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491
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7 follow
3
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grep a column based on a string
grep awk written 4 months ago by vinayjrao100 • updated 4 months ago by shenwei3564.0k
6
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2
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262
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2
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removing lines that don't match by grep
grep file handling written 5 months ago by vinayjrao100 • updated 5 months ago by michael.ante2.5k
1
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2
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248
views
2
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0
votes
2
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293
views
5 follow
2
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Editing header by adding pipe in fasta file
fasta grep header editing written 5 months ago by muhammad.arslan0 • updated 5 months ago by Hugo110
3
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0
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329
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0
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Confusion with grep command
grep deseq2 geneortholog terminal written 6 months ago by jaqx00830 • updated 6 months ago by genomax52k
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2
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322
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2
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extracting a column by grepping particular rows
grep awk written 6 months ago by vinayjrao100 • updated 6 months ago by cpad01127.7k
1
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2
answers
316
views
2
answers
Picking out the first occurrence of a gene
grep awk written 7 months ago by vinayjrao100 • updated 7 months ago by cpad01127.7k
0
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1
answer
241
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1
answer
making grep method specific in perl
perl grep finding variants written 7 months ago by bioinfo3550 • updated 7 months ago by mittu1602140
6
votes
1
answer
512
views
5 follow
1
answer
Sequence retrieval from miRBase using miRBase sequence ids
perl grep mirna rna-seq awk written 8 months ago by jinutchirayath0 • updated 8 months ago by genomax52k
1
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1
answer
314
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1
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Trying to get a GREP of things...
gene grep awk written 8 months ago by Hushus 10 • updated 8 months ago by Pierre Lindenbaum110k
0
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3
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367
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5 follow
3
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blast results: grepping and replacing
grep blast awk written 9 months ago by kinggang0 • updated 9 months ago by 5heikki7.4k
2
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1
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423
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1
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5
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1
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398
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1
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Counting occurrence of character in fastq file
grep written 11 months ago by fiona.newberry80 • updated 11 months ago by Devon Ryan81k
10
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3
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547
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9 follow
3
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fasta files: keep only lines containing certain characters + the respective sequences
fasta grep sed written 12 months ago by Tmatamatamas0 • updated 12 months ago by Paul1.1k
4
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3
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359
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3
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7
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0
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484
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0
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save plots in for loop
R grep for loop jpeg written 13 months ago by mbk0asis350
0
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3
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821
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7 follow
3
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Grep Position List
vcf grep written 14 months ago by BAGeno80 • updated 14 months ago by Maxime Lamontagne2.0k
8
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6
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612
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9 follow
6
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Use egrep on only one column
grep unix written 16 months ago by ISB0 • updated 15 months ago by Rohit1.3k
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3
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510
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3
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3
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2
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579
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Extracting pairwise alignment info
pairwise alignement grep sed unix awk written 17 months ago by Kevin D10 • updated 17 months ago by 5heikki7.4k
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