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how to filter sequence database with bash?
fasta database sequencing grep bash written 11 days ago by Lisa Prudnikow0 • updated 11 days ago by Jorge Amigo12k
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Extract fasta sequences from a file using a list in another file.
fasta grep header extract awk written 2.6 years ago by EBP9110 • updated 13 days ago by Rashedul Islam390
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Why doesn't my grep expression work?
grep regex written 5 weeks ago by requiem_data0 • updated 23 days ago by Biostar ♦♦ 20
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about Grep the complete sequences containing a specific motif in a fasta file
fasta grep sequence linux written 3.3 years ago by taojincs50 • updated 4 weeks ago by Biostar ♦♦ 20
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How to extract out specific information from files within a directory?
python grep regex written 3 months ago by deep771992chanda30 • updated 3 months ago by zx87549.9k
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Split delimited text into a new row
grep sed awk written 4 months ago by Ambika40 • updated 4 months ago by zx87549.9k
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Extract genes names from GOrilla output file
gene grep sed go awk written 4 months ago by rrapopor10 • updated 4 months ago by rpolicastro3.1k
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Finding a gene in a whole genome
gene grep tblastn written 4 months ago by Idania0
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Running a code in batch mode on a list of files
grep sed awk written 4 months ago by A3.9k
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grep -v command
grep chr1 written 5 months ago by amitpande7410 • updated 5 months ago by Pierre Lindenbaum132k
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Grep the first match for each line of a pattern file
grep written 4.0 years ago by cyril.noel100 • updated 6 months ago by michael0
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Grep VCF position awk
vcf grep awk written 7 months ago by the_cowa40 • updated 7 months ago by ATpoint44k
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Bed file grepping from the list
bed grep awk written 7 months ago by the_cowa40 • updated 7 months ago by Pierre Lindenbaum132k
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grep multiple lines form file
grep shell script tool written 8 months ago by harry10 • updated 8 months ago by ATpoint44k
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If/Else loop for grep count
python grep if else snakemake written 10 months ago by mrmrwinter30 • updated 10 months ago by Pierre Lindenbaum132k
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grep sorting question
grep awk sed unix bash written 11 months ago by rbronste370 • updated 11 months ago by _r_am32k
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Difficult filtering scenario of BED file
grep sed awk written 11 months ago by rbronste370
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How to remove just sequence ID's from a fasta file with multiple sequences
fasta grep sequence awk written 12 months ago by Nyksubuz10 • updated 12 months ago by Joe18k
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grep with -f switch is not working
grep written 13 months ago by 333509845930 • updated 13 months ago by zx87549.9k
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