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<prev • 211 results • page 1 of 8 • next >
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News: UniProtKB: Change of the annotation topic 'Enzyme regulation' to 'Activity regulation', not before Sep 12th, 2018
news uniprot written 3 months ago by Elisabeth Gasteiger • 1.5k
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News: Programmatic access uniprot.org: Deprecation of legacy REST URLs /batch and /mapping - please replace by /uploadlists
news uniprot written 3 months ago by Elisabeth Gasteiger • 1.5k
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Get all chemical compounds interacted with target
interaction cid uniprot written 9 weeks ago by emanismail.92 • 0 • updated 9 weeks ago by Denise - Open Targets • 4.6k
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Extracting Sub-cellular location from Uniprot into tabular format
swissprot uniprot parsing written 3 months ago by Michael Dondrup ♦ 44k • updated 12 weeks ago by Elisabeth Gasteiger • 1.5k
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News: uniprot.org is moving from HTTP to HTTPS
database protein news uniprot written 9 months ago by Elisabeth Gasteiger • 1.5k
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Bioconductor: Retrieve Uniprot Informations with only UniprotKB
bioconductor uniprot written 3 months ago by Benni • 20
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Federated query gives: "Usupported combination of subqueries and service invocations"
sparql linked-data uniprot written 3 months ago by cleb • 30
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How to connect uniprot and rhea?
rhea semantic-web sparql uniprot written 3 months ago by cleb • 30
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How to retrieve EC numbers and KOs for proteins of several taxons?
sparql uniprot semantic-web written 3 months ago by cleb • 30 • updated 3 months ago by me • 680
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Query UniProt database with Mnemonic identifier
R uniprot written 4 months ago by camachofrancine • 80
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Creation of UniProt Pseudo-metagenome
genome protein uniprot rna-seq written 4 months ago by Faust • 0 • updated 4 months ago by Elisabeth Gasteiger • 1.5k
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1
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Gene enrichment analysis
gene_enrichment david blast2go uniprot written 5 months ago by Ambika • 20 • updated 5 months ago by Buffo • 1.1k
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Tool: Proteome-pI - Proteome Isoelectric Point Database
proteome isoelectric point tool database uniprot nr written 6 months ago by Lukasz Kozlowski • 0
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How to parse a dat file into FASTA format?
fasta dat file biopython uniprot written 6 months ago by yuevine • 0 • updated 6 months ago by Elisabeth Gasteiger • 1.5k
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How to specify columns in Uniprot batch query from Uniprot IDs?
perl proteinid uniprot batch written 6 months ago by Solowars • 30 • updated 6 months ago by Elisabeth Gasteiger • 1.5k
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Importing Uniprot into BioSQL using BioPython takes years (nearly literally!)
biopython biosql uniprot written 7 months ago by Jan • 20
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UniProt SPARQL: retrieving proteins of a complete proteome (Escherichia coli K12)
rdf protein sparql uniprot proteome written 7 months ago by amorgat • 10 • updated 7 months ago by me • 680
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How to get a list of all human protein targets and their target class? UniProt or ChEMBL?
chembl uniprot target written 7 months ago by Leanna • 0
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Batch download UniProt proteomes with list of proteome IDs
proteome uniprot script written 8 months ago by JMac • 10 • updated 8 months ago by Elisabeth Gasteiger • 1.5k
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290
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SIFTS (uniprot <-> pdb chain) has SP_END < SP_BEG for some mappings
pdb sifts protein mapping uniprot written 8 months ago by mtscales • 20
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Cross-reference with PDB database
pdb protein uniprot sequencing written 8 months ago by adirsommer • 10 • updated 8 months ago by Elisabeth Gasteiger • 1.5k
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1
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363
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How to not get an overcounting of proteins sequences in database ?
fasta protein uniprot written 9 months ago by yayuciara • 0 • updated 8 months ago by Elisabeth Gasteiger • 1.5k
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1
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349
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1
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Get gene ids from probe ids (my idea is right or wrong)
probe david uniprot blast entrez written 9 months ago by The Last Word • 160
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News: UniProtKB FASTA headers: Addition of NCBI taxonomy identifier
fasta news taxonomy uniprot swiss-prot written 9 months ago by Elisabeth Gasteiger • 1.5k • updated 9 months ago by genomax ♦ 55k
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Accessing UNIPROT using REST API
python programmatic access rest api uniprot written 9 months ago by Natasha • 30 • updated 9 months ago by Elisabeth Gasteiger • 1.5k
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UniProt ID mapping API call
python api protein uniprot written 10 months ago by Bioaln • 280 • updated 10 months ago by Elisabeth Gasteiger • 1.5k
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1
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Pfam annotations from UniProt
uniprot pfam written 11 months ago by Selenocysteine • 500 • updated 10 months ago by Puli Chandramouli Reddy • 150
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Extracting domain list for proteins Using UniProt.ws in R
domain R bioconductor uniprot packag written 2.7 years ago by Farhad • 10 • updated 10 months ago by brennanpincardiff • 200
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UniProt references to SwissProt references?
swissprot database uniprot metaproteomics written 10 months ago by mafernandez • 0 • updated 10 months ago by Elisabeth Gasteiger • 1.5k
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retrieving transmembrane annotations from uniprot SPARQL
uniprot sparql written 11 months ago by Andrew Su ♦ 4.8k
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