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<prev • 202 results • page 1 of 7 • next >
2
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1
answer
87
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1
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Gene enrichment analysis
gene_enrichment david blast2go uniprot written 4 days ago by Ambika • 20 • updated 3 days ago by Buffo • 1.1k
0
votes
0
answers
85
views
0
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Tool: Proteome-pI - Proteome Isoelectric Point Database
proteome isoelectric point tool database uniprot nr written 28 days ago by Lukasz Kozlowski • 0
1
vote
1
answer
213
views
1
answer
How to parse a dat file into FASTA format?
fasta dat file biopython uniprot written 5 weeks ago by yuevine • 0 • updated 4 weeks ago by Elisabeth Gasteiger • 1.4k
4
votes
1
answer
157
views
1
answer
How to specify columns in Uniprot batch query from Uniprot IDs?
perl proteinid uniprot batch written 5 weeks ago by Solowars • 30 • updated 5 weeks ago by Elisabeth Gasteiger • 1.4k
7
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1
answer
262
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1
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Importing Uniprot into BioSQL using BioPython takes years (nearly literally!)
biopython biosql uniprot written 10 weeks ago by Jan • 20
3
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1
answer
178
views
1
answer
UniProt SPARQL: retrieving proteins of a complete proteome (Escherichia coli K12)
rdf protein sparql uniprot proteome written 10 weeks ago by amorgat • 10 • updated 10 weeks ago by me • 660
1
vote
2
answers
205
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2
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How to get a list of all human protein targets and their target class? UniProt or ChEMBL?
chembl uniprot target written 11 weeks ago by Leanna • 0
6
votes
2
answers
222
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2
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Batch download UniProt proteomes with list of proteome IDs
proteome uniprot script written 3 months ago by JMac • 10 • updated 3 months ago by Elisabeth Gasteiger • 1.4k
1
vote
0
answers
147
views
0
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SIFTS (uniprot <-> pdb chain) has SP_END < SP_BEG for some mappings
pdb sifts protein mapping uniprot written 3 months ago by mtscales • 20
3
votes
1
answer
234
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1
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Cross-reference with PDB database
pdb protein uniprot sequencing written 3 months ago by adirsommer • 10 • updated 3 months ago by Elisabeth Gasteiger • 1.4k
2
votes
1
answer
266
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1
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How to not get an overcounting of proteins sequences in database ?
fasta protein uniprot written 4 months ago by yayuciara • 0 • updated 3 months ago by Elisabeth Gasteiger • 1.4k
2
votes
1
answer
269
views
1
answer
Get gene ids from probe ids (my idea is right or wrong)
probe david uniprot blast entrez written 4 months ago by The Last Word • 150
1
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0
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239
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0
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News: UniProtKB FASTA headers: Addition of NCBI taxonomy identifier
fasta news taxonomy uniprot swiss-prot written 4 months ago by Elisabeth Gasteiger • 1.4k • updated 4 months ago by genomax ♦ 46k
3
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0
answers
190
views
0
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News: uniprot.org is moving from HTTP to HTTPS
database protein news uniprot written 4 months ago by Elisabeth Gasteiger • 1.4k • updated 4 months ago by genomax ♦ 46k
2
votes
1
answer
317
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1
answer
Accessing UNIPROT using REST API
python programmatic access rest api uniprot written 4 months ago by deepamahm.iisc • 20 • updated 4 months ago by Elisabeth Gasteiger • 1.4k
5
votes
2
answers
455
views
2
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UniProt ID mapping API call
python api protein uniprot written 5 months ago by Bioaln • 250 • updated 5 months ago by Elisabeth Gasteiger • 1.4k
2
votes
1
answer
468
views
1
answer
Pfam annotations from UniProt
uniprot pfam written 6 months ago by Selenocysteine • 460 • updated 5 months ago by Puli Chandramouli Reddy • 150
2
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2
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1.8k
views
2
answers
Extracting domain list for proteins Using UniProt.ws in R
domain R bioconductor uniprot packag written 2.3 years ago by Farhad • 10 • updated 5 months ago by brennanpincardiff • 200
3
votes
2
answers
299
views
2
answers
UniProt references to SwissProt references?
swissprot database uniprot metaproteomics written 5 months ago by mafernandez • 0 • updated 5 months ago by Elisabeth Gasteiger • 1.4k
5
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1
answer
342
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1
answer
retrieving transmembrane annotations from uniprot SPARQL
uniprot sparql written 6 months ago by Andrew Su ♦ 4.8k
17
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2
answers
2.6k
views
7 follow
2
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Describe Your Architecture: Uniprot
java database uniprot written 5.2 years ago by Pierre Lindenbaum ♦ 106k • updated 6 months ago by navela78 • 50
2
votes
1
answer
339
views
1
answer
Formatting problem when converting from UniProt to Entrez Gene ID format
R uniprot conversion entrez written 7 months ago by EverInEarnest • 30 • updated 7 months ago by Kevin Blighe ♦ 17k
4
votes
1
answer
352
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1
answer
Using UniProt entry names to retrieve UniProtEntry data (ID and sequence) using UniProt JAPI (Java)
java sequence uniprot written 7 months ago by koenrademaker • 10 • updated 7 months ago by Pierre Lindenbaum ♦ 106k
5
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1
answer
559
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5 follow
1
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Calculate the coverage of a protein having a list of its peptides
R protein coverage uniprot written 7 months ago by arronar • 140 • updated 7 months ago by Jean-Karim Heriche ♦ 15k
1
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2
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313
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2
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Batch Download Enzymes by EC Number
ec number sequence uniprot written 7 months ago by irazoqui.matias • 10
4
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4
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2.1k
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6 follow
4
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How to convert bulk UniProt Id to GO terms/Ids?
assembly uniprot rna-seq written 14 months ago by mirzaei86.vahid • 10 • updated 7 months ago by chr.ebeling • 0
0
votes
1
answer
434
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1
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merging humsavar dataset with UniprotKB human variation
ensembl swissprot uniprot snp annovar written 8 months ago by arronslacey • 220 • updated 8 months ago by emmahe • 40
1
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0
answers
490
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0
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Download UniProt databases via HTTP/HTTPS instead of FTP? (Google Apps Scripts Question)
google sequence uniprot databases ftp written 8 months ago by parism9 • 10 • updated 8 months ago by me • 660
9
votes
1
answer
1.5k
views
1
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Mapping HGNC ID to uniprot ID
gene uniprot rna-seq written 2.8 years ago by Paul • 50
0
votes
2
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361
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5 follow
2
answers
how to extract protein info for a bunch of IDs
ncbi protein uniprot written 9 months ago by Learner • 90 • updated 9 months ago by Elisabeth Gasteiger • 1.4k
<prev • 202 results • page 1 of 7 • next >
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