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Comment:
Comment: STAR alignment setting for RNA-Seq data from mouse background expressing a human
8 weeks ago by
marionette.kent
• 0
2
votes
3
replies
400
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STAR alignment setting for RNA-Seq data from mouse background expressing a human ortholog
alignment
star
ortholog
rna-seq
updated 8 weeks ago by
swbarnes2
14k • written 8 weeks ago by
marionette.kent
• 0
0
votes
1
reply
448
views
Comment:
Comment: Collapsing Transcript Count Matrix to Gene Count Matrix
4 months ago by
marionette.kent
• 0
2
votes
3
replies
448
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Collapsing Transcript Count Matrix to Gene Count Matrix
rna-seq
gene
dge
transcripts
updated 4 months ago by
Ram
43k • written 4 months ago by
marionette.kent
• 0
0
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0
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342
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Incorporating information of control samples in sva, ComBat or models in DGE analysis (DESeq2/limma, etc)
sva
limma
Batch
DESeq2
Effect
2.1 years ago by
marionette.kent
• 0
0
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448
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DESeq2 for comparison of enhancer activity (eRNA)
enhancer
eRNA
DESeq2
2.3 years ago by
marionette.kent
• 0
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