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390
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Comment: Comment: Are the top 50 features in heat map for each phenotype in dataset generated by G
11 weeks ago by TM ▴ 20
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1
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390
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Comment: Comment: Are the top 50 features in heat map for each phenotype in dataset generated by G
11 weeks ago by TM ▴ 20
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4
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390
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Are the top 50 features in heat map for each phenotype in dataset generated by GSEA called differentially expressed genes?
GSEA EdgeR Heatmap DEGs
11 weeks ago by TM ▴ 20
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377
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Comment: Comment: EdgeR, Please help me review my R script in glm approach
4 months ago by TM ▴ 20
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0
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377
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Comment: Comment: EdgeR, Please help me review my R script in glm approach
4 months ago by TM ▴ 20
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0
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377
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Comment: Comment: EdgeR, Please help me review my R script in glm approach
4 months ago by TM ▴ 20
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5
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377
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EdgeR, Please help me review my R script in glm approach
EdgeR DEGs
4 months ago by TM ▴ 20
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551
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Comment: Comment: EdgeR, a few DEGs found between group comparison, Can I go to further downstream
4 months ago by TM ▴ 20
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1
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551
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Comment: Comment: EdgeR, a few DEGs found between group comparison, Can I go to further downstream
4 months ago by TM ▴ 20
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9
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551
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EdgeR, a few DEGs found between group comparison, Can I go to further downstream analysis like heat map, GSEA, GO-BP and KEGG with these few DEGs?
EdgeR DEGs
4 months ago by TM ▴ 20
1
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0
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551
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Comment: Comment: EdgeR, a few DEGs found between group comparison, Can I go to further downstream
4 months ago by TM ▴ 20
0
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0
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551
views
Comment: Comment: EdgeR, a few DEGs found between group comparison, Can I go to further downstream
4 months ago by TM ▴ 20
1
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0
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551
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Comment: Comment: EdgeR, a few DEGs found between group comparison, Can I go to further downstream
4 months ago by TM ▴ 20
0
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1
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369
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Comment: Comment: EdgeR, How to remove non-coding RNA before DEG analysis?
5 months ago by TM ▴ 20
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4
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369
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EdgeR, How to remove non-coding RNA before DEG analysis?
EdgeR DEGs
updated 5 months ago by 64k • written 5 months ago by ▴ 20
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0
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276
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Comment: Comment: EdgeR, only 1 DEG between 2 groups, Is it necessary to remove non-coding RNA be
5 months ago by TM ▴ 20
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2
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276
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EdgeR, only 1 DEG between 2 groups, Is it necessary to remove non-coding RNA before DEG analysis?
EdgeR DEGs
5 months ago by TM ▴ 20
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1
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205
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HT-seq, No feature, Alignment not unique Output
No feature HTSeq read
updated 5 months ago by ▴ 130 • written 5 months ago by ▴ 20
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1
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960
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Comment: Comment: Edge R, Error in data.frame(..., check.names = FALSE) : arguments imply diffe
5 months ago by TM ▴ 20
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9
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960
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Edge R, Error in data.frame(..., check.names = FALSE) : arguments imply differing number of rows: 60649, 0
EdgeR DEGs
updated 5 months ago by 36k • written 5 months ago by ▴ 20
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0
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960
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Comment: Comment: Edge R, Error in data.frame(..., check.names = FALSE) : arguments imply diffe
5 months ago by TM ▴ 20
0
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1
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960
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Comment: Comment: Edge R, Error in data.frame(..., check.names = FALSE) : arguments imply diffe
updated 5 months ago by 36k • written 5 months ago by ▴ 20
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2
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960
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Comment: Comment: Edge R, Error in data.frame(..., check.names = FALSE) : arguments imply diffe
updated 5 months ago by 36k • written 5 months ago by ▴ 20
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0
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433
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Comment: Comment: HT-Seq, Gene ID appeared in Gene Name row
5 months ago by TM ▴ 20
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0
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308
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Comment: Comment: edgeR, how to write the model matrix for comparison?
5 months ago by TM ▴ 20
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1
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433
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Comment: Comment: HT-Seq, Gene ID appeared in Gene Name row
5 months ago by TM ▴ 20
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0
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433
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Comment: Comment: HT-Seq, Gene ID appeared in Gene Name row
5 months ago by TM ▴ 20
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6
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433
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HT-Seq, Gene ID appeared in Gene Name row
RNA-seq output Counting table HT-seq
updated 5 months ago by 94k • written 5 months ago by ▴ 20
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2
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308
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edgeR, how to write the model matrix for comparison?
EdgeR
5 months ago by TM ▴ 20
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