Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
0
votes
0
replies
309
views
Comment: Comment: How to trim transcripts using information from NCBI contamination screen report
2 days ago by Lada ▴ 30
0
votes
1
reply
309
views
Comment: Comment: How to trim transcripts using information from NCBI contamination screen report
4 days ago by Lada ▴ 30
0
votes
0
replies
309
views
Comment: Comment: How to trim transcripts using information from NCBI contamination screen report
4 days ago by Lada ▴ 30
2
votes
5
replies
309
views
How to trim transcripts using information from NCBI contamination screen report
RNAseq assembly transcriptome contamination
2 days ago by Lada ▴ 30
0
votes
0
replies
23k
views
Comment: Comment: BLAST options: max_target_seqs and num_alignments
5 weeks ago by Lada ▴ 30
0
votes
0
replies
356
views
Pearson correlation for RNAseq data - input formats
vst Pearson-correlation TPM rlog RNA-seq
updated 5 months ago by 43k • written 5 months ago by ▴ 30
0
votes
0
replies
298
views
Salmon - mapping outputs
transcriptome RNAseq Salmon
6 months ago by Lada ▴ 30
0
votes
0
replies
1.3k
views
Comment: Comment: Providing multiple read files to Salmon
6 months ago by Lada ▴ 30
0
votes
1
reply
1.3k
views
Comment: Comment: Providing multiple read files to Salmon
6 months ago by Lada ▴ 30
0
votes
1
reply
2.4k
views
Comment: Comment: How to remove fasta headers in a multifasta file and write file name as a fasta
7 months ago by Lada ▴ 30
0
votes
2
replies
2.4k
views
Comment: Comment: How to remove fasta headers in a multifasta file and write file name as a fasta
7 months ago by Lada ▴ 30
0
votes
0
replies
346
views
OrthoPhy
orthophy orthofinder
updated 7 months ago by 43k • written 7 months ago by ▴ 30
0
votes
2
replies
2.4k
views
Comment: Comment: How to remove fasta headers in a multifasta file and write file name as a fasta
updated 7 months ago by 141k • written 7 months ago by ▴ 30
0
votes
0
replies
577
views
Comment: Comment: ML tree inferred from multiple genes
7 months ago by Lada ▴ 30
1
vote
2
replies
577
views
ML tree inferred from multiple genes
phylogeny iqtree ML phylotranscriptomics orthologues
7 months ago by Lada ▴ 30
1
vote
0
replies
835
views
Answer: Answer: How to download Time Calibration Data for Phylogenetic tree estimation ?
8 months ago by Lada ▴ 30
0
votes
0
replies
919
views
Answer: Answer: Fossil calibration in PAML software?
8 months ago by Lada ▴ 30
0
votes
0
replies
849
views
Comment: Comment: Multiple sequence aligments - parallelisation
8 months ago by Lada ▴ 30
0
votes
1
reply
849
views
Comment: Comment: Multiple sequence aligments - parallelisation
8 months ago by Lada ▴ 30
0
votes
1
reply
849
views
Comment: Comment: Multiple sequence aligments - parallelisation
8 months ago by Lada ▴ 30
3
votes
5
replies
849
views
Multiple sequence aligments - parallelisation
MSA phylotranscriptomics muscle clustal
8 months ago by Lada ▴ 30
0
votes
0
replies
743
views
Comment: Comment: Expected number of raw reads in fq.gz files in PE sequencing
8 months ago by Lada ▴ 30
0
votes
0
replies
743
views
Comment: Comment: Expected number of raw reads in fq.gz files in PE sequencing
8 months ago by Lada ▴ 30
3
votes
5
replies
743
views
Expected number of raw reads in fq.gz files in PE sequencing
RNA-seq fastq transcriptomics
updated 8 months ago by 43k • written 8 months ago by ▴ 30
0
votes
0
replies
777
views
Comment: Comment: EggNOG mapper annotation results
8 months ago by Lada ▴ 30
0
votes
1
reply
988
views
Comment: Comment: Comparative transcriptomics
11 months ago by Lada ▴ 30
0
votes
0
replies
471
views
Comment: Comment: Corset -D parameter
13 months ago by Lada ▴ 30
1
vote
2
replies
471
views
Corset -D parameter
RNAseq transcriptomic Corset
13 months ago by Lada ▴ 30
0
votes
0
replies
896
views
Comment: Comment: Salmon lib_format_counts.json - explanation
14 months ago by Lada ▴ 30
2
votes
2
replies
896
views
Salmon lib_format_counts.json - explanation
RNAseq strand-specificity transcriptomic Salmon
14 months ago by Lada ▴ 30
0
votes
0
replies
429
views
Comment: Comment: What is correct percentage of sense-stranded transcripts in directional de novo
14 months ago by Lada ▴ 30
0
votes
1
reply
429
views
What is correct percentage of sense-stranded transcripts in directional de novo assemblies ?
Trinity strand-specificity RNA-seq Transdecoder
updated 14 months ago by 43k • written 14 months ago by ▴ 30
0
votes
1
reply
26k
views
Comment: Comment: Gene Set Enrichment Analysis after DESeq2
14 months ago by Lada ▴ 30
0
votes
0
replies
2.1k
views
Comment: Comment: GSEA on nonmodel organisms
15 months ago by Lada ▴ 30
0
votes
0
replies
2.1k
views
Comment: Comment: GSEA on nonmodel organisms
15 months ago by Lada ▴ 30
2
votes
4
replies
2.1k
views
GSEA on nonmodel organisms
GSEA RNAseq transcriptomics multispecies R
15 months ago by Lada ▴ 30
0
votes
0
replies
1.2k
views
Comment: Comment: Differentially gene expression multispecies
15 months ago by Lada ▴ 30
1
vote
0
replies
520
views
Comment: Comment: How to normalise counts to compare RNAseq results between two spcecies
15 months ago by Lada ▴ 30
0
votes
1
reply
988
views
Comment: Comment: Comparative transcriptomics
15 months ago by Lada ▴ 30
0
votes
0
replies
984
views
Comment: Comment: comparative transcriptome - how to normalize and analyze DEGs?
15 months ago by Lada ▴ 30
0
votes
1
reply
1.6k
views
Comment: Comment: Differential expression analysis
15 months ago by Lada ▴ 30
0
votes
0
replies
916
views
Comment: Comment: When comparing gene expression in different species, should I assemble separate
updated 15 months ago by 43k • written 15 months ago by ▴ 30
0
votes
0
replies
669
views
Answer: Answer: Differential Expression Analyses between closely related species
15 months ago by Lada ▴ 30
0
votes
0
replies
644
views
Comment: Comment: Transcriptome assembly -mixing stranded and non-stranded data
2.1 years ago by Lada ▴ 30
0
votes
1
reply
644
views
Comment: Comment: Transcriptome assembly -mixing stranded and non-stranded data
2.1 years ago by Lada ▴ 30
3
votes
4
replies
644
views
Transcriptome assembly -mixing stranded and non-stranded data
Transcriptome assembly
2.1 years ago by Lada ▴ 30
0
votes
0
replies
2.7k
views
Answer: Answer: strand-specific transcriptome Oases vs. CLC
2.1 years ago by Lada ▴ 30
47 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6