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Comment:
Comment: Fast QC results (per sequence GC content) - RNA seq
6 months ago by
Trivas
★ 1.7k
0
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0
replies
573
views
Comment:
Comment: Interpreting the CpG pearson correlation plot
6 months ago by
Trivas
★ 1.7k
1
vote
1
reply
2.0k
views
Comment:
Comment: STAR Genome index Error
7 months ago by
Trivas
★ 1.7k
0
votes
1
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2.0k
views
Comment:
Comment: STAR Genome index Error
7 months ago by
Trivas
★ 1.7k
0
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0
replies
685
views
Answer:
Answer: tximport error: vroom
7 months ago by
Trivas
★ 1.7k
0
votes
0
replies
575
views
Answer:
Answer: DEG gene list and find common TF from public ChlP-Seq data
7 months ago by
Trivas
★ 1.7k
0
votes
0
replies
584
views
Answer:
Answer: GOSt Plot
7 months ago by
Trivas
★ 1.7k
0
votes
0
replies
528
views
Answer:
Answer: How to import bigwig files into igvR
7 months ago by
Trivas
★ 1.7k
0
votes
0
replies
678
views
Comment:
Comment: Subclustering of intergated cells from scRNA-seq data
7 months ago by
Trivas
★ 1.7k
1
vote
1
reply
452
views
Answer:
Answer: Is it possible to convert 3 prime sequencing read counts into TPMs?
7 months ago by
Trivas
★ 1.7k
0
votes
2
replies
1.3k
views
Comment:
Comment: Should I Learn Docker to Run Command Line Bioinformatics Tool?
7 months ago by
Trivas
★ 1.7k
0
votes
0
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674
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Comment:
Comment: GO annotation in R using library(org.Hs.eg.db)
7 months ago by
Trivas
★ 1.7k
2
votes
0
replies
538
views
Answer:
Answer: Normalisation on subset of genes
8 months ago by
Trivas
★ 1.7k
0
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0
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1.7k
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Comment:
Comment: bedops alternative for bedtools -unionbedg ?
8 months ago by
Trivas
★ 1.7k
1
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0
replies
628
views
Comment:
Comment: Heatmap ChIP-seq average signal
8 months ago by
Trivas
★ 1.7k
1
vote
0
replies
1.2k
views
Comment:
Comment: Identifying transcription factors for a list of genes
8 months ago by
Trivas
★ 1.7k
0
votes
0
replies
680
views
Comment:
Comment: Get the "average" of a column in a heatmap, combine 3 heatmaps into 1?
8 months ago by
Trivas
★ 1.7k
2
votes
1
reply
567
views
Answer:
Answer: What to do after importing quantification with tximport
8 months ago by
Trivas
★ 1.7k
2
votes
0
replies
522
views
Comment:
Comment: How to add value of column to barchart on hover?
8 months ago by
Trivas
★ 1.7k
1
vote
1
reply
522
views
Comment:
Comment: How to add value of column to barchart on hover?
8 months ago by
Trivas
★ 1.7k
0
votes
0
replies
543
views
Comment:
Comment: Zero Mapping rate
8 months ago by
Trivas
★ 1.7k
0
votes
0
replies
1.5k
views
Comment:
Comment: Trimming of reads in miRNA-Seq data
8 months ago by
Trivas
★ 1.7k
0
votes
1
reply
1.5k
views
Comment:
Comment: Trimming of reads in miRNA-Seq data
8 months ago by
Trivas
★ 1.7k
0
votes
1
reply
2.1k
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Comment:
Comment: Heatmap legend position change
8 months ago by
Trivas
★ 1.7k
0
votes
1
reply
1.9k
views
Comment:
Comment: What to do about "outlier" values in volcano plot?
9 months ago by
Trivas
★ 1.7k
2
votes
2
replies
664
views
Answer:
Answer: how to run ROSE to find super enhnacers-
9 months ago by
Trivas
★ 1.7k
1
vote
0
replies
465
views
Answer:
Answer: W,M,R nucleotides
9 months ago by
Trivas
★ 1.7k
0
votes
0
replies
612
views
Comment:
Comment: How to Detect Presence of HPV-33 in Sample Data (FASTQ, BAM, VCF on GRCh37)
9 months ago by
Trivas
★ 1.7k
0
votes
0
replies
445
views
Answer:
Answer: Bowtie - multiple alignments and seed length vs read length in miRNA mapping
9 months ago by
Trivas
★ 1.7k
2
votes
0
replies
482
views
Answer:
Answer: Calculate TMB from BAM file
9 months ago by
Trivas
★ 1.7k
1
vote
2
replies
1.1k
views
Comment:
Comment: Double biological replication when using DESeq2
9 months ago by
Trivas
★ 1.7k
0
votes
0
replies
633
views
Comment:
Comment: Convert with respect to first column (repeated values) into rows (transposon)
9 months ago by
Trivas
★ 1.7k
0
votes
0
replies
1.2k
views
Comment:
Comment: bedtools coverage, Use “stdin”
9 months ago by
Trivas
★ 1.7k
0
votes
1
reply
633
views
Comment:
Comment: Convert with respect to first column (repeated values) into rows (transposon)
9 months ago by
Trivas
★ 1.7k
0
votes
0
replies
378
views
Answer:
Answer: How to add new coordinates to the existing .gtf annotation file
9 months ago by
Trivas
★ 1.7k
0
votes
0
replies
624
views
Answer:
Answer: Lollipop plots for structural variation coordinates
9 months ago by
Trivas
★ 1.7k
1
vote
1
reply
1.3k
views
Comment:
Comment: Comparing P-Values & FDR adjusted p-values between RNA-Seq experiments?
10 months ago by
Trivas
★ 1.7k
0
votes
0
replies
769
views
Comment:
Comment: IsoformSwitchAnalyzeR Error in reading GTF file
10 months ago by
Trivas
★ 1.7k
0
votes
1
reply
769
views
Comment:
Comment: IsoformSwitchAnalyzeR Error in reading GTF file
10 months ago by
Trivas
★ 1.7k
0
votes
0
replies
622
views
Answer:
Answer: Is it possible to do standard GSEA in R?
10 months ago by
Trivas
★ 1.7k
1
vote
1
reply
1.3k
views
Comment:
Comment: differential splicing between two groups for 5 genes
10 months ago by
Trivas
★ 1.7k
0
votes
2
replies
1.3k
views
Answer:
Answer: differential splicing between two groups for 5 genes
10 months ago by
Trivas
★ 1.7k
0
votes
1
reply
1.1k
views
Comment:
Comment: IsoformSwitchAnalyserR lmportR data warning.
10 months ago by
Trivas
★ 1.7k
3
votes
0
replies
728
views
Answer:
Answer: Veen diagram in RNA-Seq
10 months ago by
Trivas
★ 1.7k
1
vote
1
reply
498
views
Best practice for normalizing sequencing depth for differential miRNA expression?
DESeq2
miRge3
normalization
miRNA
updated 10 months ago by
biofalconch
★ 1.1k • written 10 months ago by
Trivas
★ 1.7k
0
votes
2
replies
1.3k
views
Answer:
Answer: Providing multiple read files to Salmon
10 months ago by
Trivas
★ 1.7k
3
votes
0
replies
914
views
Answer:
Answer: extreme high log2FoldChange in DESeq2 result
10 months ago by
Trivas
★ 1.7k
0
votes
1
reply
1.3k
views
Answer:
Answer: A question about the raw RNA-seq processing workflow
10 months ago by
Trivas
★ 1.7k
2
votes
1
reply
590
views
Answer:
Answer: I don't really understand what fold mean means
10 months ago by
Trivas
★ 1.7k
1
vote
1
reply
1.1k
views
Answer:
Answer: How to get information about promoter from bulk-RNAseq?
11 months ago by
Trivas
★ 1.7k
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