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Answer: Answer: How to compare RNA expression correlation?
14 months ago by Trivas ★ 1.8k
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1
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1.2k
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Comment: Comment: DGE/DEG Analysis for comparing multiple cell lines
14 months ago by Trivas ★ 1.8k
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1
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1.2k
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Comment: Comment: DGE/DEG Analysis for comparing multiple cell lines
14 months ago by Trivas ★ 1.8k
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0
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519
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Answer: Answer: How can I plot the heatmap with the fold changes of ChIP-seq occupancy levels of
15 months ago by Trivas ★ 1.8k
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1
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3.1k
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Answer: Answer: Aberrant splicing in bulk RNAseq
15 months ago by Trivas ★ 1.8k
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1
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1.0k
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Comment: Comment: What's the absolute easiest way of visualizing stranded RNA-seq data on custom g
15 months ago by Trivas ★ 1.8k
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1
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1.0k
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Comment: Comment: What's the absolute easiest way of visualizing stranded RNA-seq data on custom g
15 months ago by Trivas ★ 1.8k
1
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5
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1.0k
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What's the absolute easiest way of visualizing stranded RNA-seq data on custom genomes?
gviz RNAseq stranded R
updated 15 months ago by 14k • written 15 months ago by ★ 1.8k
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1
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1.6k
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Comment: Comment: Using salmon on HISAT2 BAM files for transcript quantification
16 months ago by Trivas ★ 1.8k
3
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3
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1.4k
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Adding lfcShrink to DESeq2 analysis
DGE DESeq2 lfcShrink
updated 17 months ago by 82k • written 17 months ago by ★ 1.8k
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1
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963
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Comment: Comment: deeptools heatmap mostly empty
17 months ago by Trivas ★ 1.8k
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1.3k
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Comment: Comment: Easier way to add another column if values in another fall within a range in R
17 months ago by Trivas ★ 1.8k
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0
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1.3k
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Answer: Answer: Finding unique and identical rows between multiple columns of a data frame in R
18 months ago by Trivas ★ 1.8k
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1
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1.6k
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Comment: Comment: Differential expression analysis
18 months ago by Trivas ★ 1.8k
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2
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1.6k
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Answer: Answer: Differential expression analysis
18 months ago by Trivas ★ 1.8k
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0
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918
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Comment: Comment: How can I get counts from transgenic expression in RNA-seq data?
18 months ago by Trivas ★ 1.8k
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0
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647
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Comment: Comment: problem with tidyverse for gene expression profile
18 months ago by Trivas ★ 1.8k
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1
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1.3k
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Comment: Comment: Get transcription factor motif from list of gene symbols
19 months ago by Trivas ★ 1.8k
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1
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1.3k
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Comment: Comment: Get transcription factor motif from list of gene symbols
19 months ago by Trivas ★ 1.8k
4
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6
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1.3k
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Get transcription factor motif from list of gene symbols
motif factor R transcription
updated 19 months ago by 4.6k • written 19 months ago by ★ 1.8k
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0
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1.3k
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Comment: Comment: How to perform paired t-test in R for obtaining p-value of each gene?
19 months ago by Trivas ★ 1.8k
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1
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594
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Answer: Answer: Gviz group labels overlap
19 months ago by Trivas ★ 1.8k
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0
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736
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Comment: Comment: What is the best way to pre-process RNA-Seq data?
19 months ago by Trivas ★ 1.8k
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1
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656
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Answer: Answer: Detection of guest reads in Dual RNA-Seq
19 months ago by Trivas ★ 1.8k
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1
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989
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Comment: Comment: Help with plotting DEG-specific heatmap
20 months ago by Trivas ★ 1.8k
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1
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522
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Comment: Comment: qPCR RT experiment set up
20 months ago by Trivas ★ 1.8k
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1
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753
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Comment: Comment: Genes time-series plots
20 months ago by Trivas ★ 1.8k
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1
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753
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Answer: Answer: Genes time-series plots
20 months ago by Trivas ★ 1.8k
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0
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410
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Answer: Answer: Mark exons and introns in Querey based on NCBI graphics
20 months ago by Trivas ★ 1.8k
1
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0
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885
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Comment: Comment: How to annotate probe to nearest gene promoter?
20 months ago by Trivas ★ 1.8k
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1
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879
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Comment: Comment: switchAnalyzeRlist conditions reversed
20 months ago by Trivas ★ 1.8k
2
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1
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1.1k
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Answer: Answer: Deeptools - removing small clusters
20 months ago by Trivas ★ 1.8k
0
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0
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841
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Comment: Comment: For the given index number, find which amino acid is present in the given index
20 months ago by Trivas ★ 1.8k
0
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1
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594
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Best way to make a PCA plot integrating in-house data with public data?
tximport SRA RNA-seq plot PCA
updated 20 months ago by 3.2k • written 20 months ago by ★ 1.8k
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1
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1.4k
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Comment: Comment: PlotPCA shows small plot in plot section of R studio
21 months ago by Trivas ★ 1.8k
0
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1
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2.5k
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Answer: Answer: Trim Galore Anaconda
21 months ago by Trivas ★ 1.8k
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0
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5.7k
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Comment: Comment: unimplemented type 'list' in 'EncodeElement' error in a Rscript run in Ubuntu te
21 months ago by Trivas ★ 1.8k
0
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1
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1.1k
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Answer: Answer: Merging different fastq files into one folder
21 months ago by Trivas ★ 1.8k
0
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0
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612
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Answer: Answer: R Gviz - plot probes against a gene ( not the transcripts, just the gene)
21 months ago by Trivas ★ 1.8k
0
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0
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537
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Answer: Answer: deeptools heatmap
21 months ago by Trivas ★ 1.8k
0
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1
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559
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Answer: Answer: how to use mirdeep2 without a small RNA library
21 months ago by Trivas ★ 1.8k
2
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0
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760
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Comment: Comment: Does comparison between two groups still make sense if PCA plot suggest no diffe
21 months ago by Trivas ★ 1.8k
2
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0
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897
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Answer: Answer: Concatenate information columns from multiple identical bed files.
21 months ago by Trivas ★ 1.8k
0
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0
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435
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Comment: Comment: How to change KEGG identifiers to human-read gene names in heatmap function R
21 months ago by Trivas ★ 1.8k
2
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0
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631
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Comment: Comment: How can I create plot for unique and redundant miRNA using ggplot?
21 months ago by Trivas ★ 1.8k
1
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1
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631
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Comment: Comment: How can I create plot for unique and redundant miRNA using ggplot?
21 months ago by Trivas ★ 1.8k
0
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1
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902
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Answer: Answer: Help with adding variables to PCA
21 months ago by Trivas ★ 1.8k
2
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2
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928
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Answer: Answer: Bam file from STAR
21 months ago by Trivas ★ 1.8k
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0
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1.3k
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Answer: Answer: How to delete all numbers after dot in a column in R?
21 months ago by Trivas ★ 1.8k
0
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1
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3.3k
views
Comment: Comment: Extracting fasta sequence in R
21 months ago by Trivas ★ 1.8k
291 results • Page 4 of 6
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