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RSEM expression values
RSem Trinity
updated 2.6 years ago by 45k • written 2.6 years ago by • 0
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477
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align_and_estimate_abundance.pl
trinityrnaseq expression-values
updated 2.6 years ago by 45k • written 2.8 years ago by • 0
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7.1k
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Comment: Comment: STRINGTIE WARNING: no reference transcripts were found for the genomic sequences
2.9 years ago by Roy.anupama11 • 0
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0
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523
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Heteroduplex identification
Heteroduplex loop identification
2.9 years ago by Roy.anupama11 • 0
0
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0
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540
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How does Indexing and de-novo identification and masking of repetitive elements occurs?
RepeatMasker RepeatModeler Indexing Index
3.2 years ago by Roy.anupama11 • 0
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1
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1.1k
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Comment: Comment: Genome indexing
3.3 years ago by Roy.anupama11 • 0
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3
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1.1k
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Genome indexing
genomeIndexing Indexing
updated 3.3 years ago by ▴ 810 • written 3.3 years ago by • 0
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0
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1.4k
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Comment: Comment: FASTA sequence retrieval
3.4 years ago by Roy.anupama11 • 0
0
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1
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827
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What does different columns for merged gtf file represents?
StringTie GTF merged
updated 3.4 years ago by 4.8k • written 3.4 years ago by • 0
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0
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989
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Comment: Comment: FASTA sequences extraction
3.4 years ago by Roy.anupama11 • 0
2
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2
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989
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FASTA sequences extraction
FASTA sequences
3.4 years ago by Roy.anupama11 • 0
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4
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1.4k
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FASTA sequence retrieval
FASTA Genes DEGs
3.4 years ago by Roy.anupama11 • 0
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3
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1.0k
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How to search and identify the function of DEGs
function functional annoatation DEGs
updated 3.4 years ago by ▴ 810 • written 3.4 years ago by • 0
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0
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554
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analyze_diff_expr.pl result explanation
Trinity analyze_diff_expr.pl UP.subset DEGs
3.4 years ago by Roy.anupama11 • 0
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0
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1.2k
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Comment: Comment: Finding DEGs using script available in Trinity for RSEM
3.5 years ago by Roy.anupama11 • 0
0
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1
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1.2k
views
Comment: Comment: Finding DEGs using script available in Trinity for RSEM
3.5 years ago by Roy.anupama11 • 0
0
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3
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1.2k
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Finding DEGs using script available in Trinity for RSEM
run_DE_analysis.pl Trinity RSEM DEGs
3.5 years ago by Roy.anupama11 • 0
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0
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2.7k
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Comment: Comment: Trinity run_DE_analysis samples.txt file format?
3.5 years ago by Roy.anupama11 • 0
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1
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1.1k
views
Comment: Comment: Using RSem of Trinity, align_and_estimate_abundance.pl script, all folders for s
3.5 years ago by Roy.anupama11 • 0
0
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3
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1.1k
views
Using RSem of Trinity, align_and_estimate_abundance.pl script, all folders for sample/condition is not being created
RSem Quantification Trinity
updated 2.6 years ago by 45k • written 3.5 years ago by • 0
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0
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1.7k
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Comment: Comment: Finding DEGs from HISAT2/STRINGTIE output
3.5 years ago by Roy.anupama11 • 0
0
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1
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1.7k
views
Comment: Comment: Finding DEGs from HISAT2/STRINGTIE output
3.5 years ago by Roy.anupama11 • 0
0
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1
reply
1.7k
views
Comment: Comment: Finding DEGs from HISAT2/STRINGTIE output
3.5 years ago by Roy.anupama11 • 0
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6
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1.7k
views
Finding DEGs from HISAT2/STRINGTIE output
EdgeR pipeline BowTie Kallisto RSem DEGs
3.5 years ago by Roy.anupama11 • 0
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