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9
votes
0
replies
10k
views
Answer: A: Sort Multiple Fasta Numerically
updated 4.6 years ago by 89k • written 13.5 years ago by 33k
58
votes
42
replies
9.0k
views
12 follow
Forum: Why is academic software hard to install?
software-installation
updated 3.7 years ago by 45k • written 10.9 years ago by 33k
2
votes
0
replies
108k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 5.3 years ago by 45k • written 12.9 years ago by 33k
0
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1
reply
108k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 5.3 years ago by 45k • written 12.9 years ago by 33k
7
votes
0
replies
108k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 5.3 years ago by 45k • written 12.4 years ago by 33k
5
votes
0
replies
108k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 5.3 years ago by 45k • written 13.4 years ago by 33k
3
votes
1
reply
5.7k
views
Comment: C: weld (former brew) - yet another fastq utility
updated 5.7 years ago by 45k • written 9.6 years ago by 33k
7
votes
6
replies
21k
views
Answer: Answer: Choosing Random Set Of Seqs From Larger Set
updated 3.4 years ago by 45k • written 13.5 years ago by 33k
4
votes
0
replies
12k
views
Answer: A: parse large vcf file?
updated 5.7 years ago by 45k • written 11.3 years ago by 33k
2
votes
1
reply
4.5k
views
Answer: A: BWA and SOAP2 cannot map a particular sequence which exists in the genome
updated 5.8 years ago by 45k • written 11.4 years ago by 33k
54
votes
11
replies
69k
views
Answer: A: How To Efficiently Parse A Huge Fastq File?
updated 5.8 years ago by 45k • written 14.1 years ago by 33k
1
vote
2
replies
12k
views
Comment: C: Extracting subset of records from FASTA/FASTQ files based on exact/pattern match
updated 5.8 years ago by 45k • written 11.4 years ago by 33k
2
votes
1
reply
12k
views
Comment: C: Extracting subset of records from FASTA/FASTQ files based on exact/pattern match
updated 5.8 years ago by 45k • written 11.4 years ago by 33k
3
votes
1
reply
23k
views
Answer: A: Vcf Sort According To Order Of The Reference File
updated 5.8 years ago by 45k • written 11.9 years ago by 33k
0
votes
0
replies
16k
views
Comment: C: Fastq Quality Control And Reporting - Aka Fastqc Versus The New Contenders
updated 5.8 years ago by 45k • written 12.6 years ago by 33k
1
vote
1
reply
16k
views
Comment: C: Fastq Quality Control And Reporting - Aka Fastqc Versus The New Contenders
updated 5.8 years ago by 45k • written 12.6 years ago by 33k
9
votes
1
reply
156k
views
Answer: A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 5.8 years ago by 45k • written 12.6 years ago by 33k
4
votes
0
replies
8.5k
views
Answer: A: How To Get Fasta Format Using Fastafrombed Or How To Turn Linearized Fasta To Th
updated 5.8 years ago by 45k • written 12.7 years ago by 33k
14
votes
1
reply
21k
views
Answer: A: GFA to Fasta file
updated 5.8 years ago by 45k • written 9.8 years ago by 33k
7
votes
1
reply
8.8k
views
Answer: A: Samtofastq: Net.Sf.Picard.Picardexception: "Found N Unpaired Mates "
updated 5.8 years ago by 45k • written 12.5 years ago by 33k
0
votes
0
replies
28k
views
Comment: C: Efficiently Iterating Over Fastq Records From Python
updated 5.8 years ago by 45k • written 13.8 years ago by 33k
0
votes
0
replies
70k
views
Comment: C: How To Sort Bed Format File
updated 5.8 years ago by 45k • written 12.6 years ago by 33k
10
votes
1
reply
70k
views
Answer: A: How To Sort Bed Format File
updated 5.8 years ago by 45k • written 12.6 years ago by 33k
0
votes
0
replies
13k
views
Comment: C: Low Support Value Of Phylogenetic Trees
updated 5.8 years ago by 45k • written 13.9 years ago by 33k
6
votes
1
reply
7.0k
views
Answer: A: Lack of consensus between NGS & Sanger sequencing on indels/mutations
updated 5.8 years ago by 45k • written 9.8 years ago by 33k
3
votes
0
replies
6.8k
views
Answer: A: Extract Flanking Region Of A Snp
updated 5.8 years ago by 45k • written 14.1 years ago by 33k
4
votes
0
replies
11k
views
Answer: A: Insert Length Vs Nominal Length For Paired-End Data
updated 5.8 years ago by 45k • written 14.0 years ago by 33k
25
votes
6
replies
5.5k
views
Answer: A: Does Pre-Publishing Open Source Algorithms Hurt Chances Of Getting Published?
updated 5.8 years ago by 45k • written 14.1 years ago by 33k
4
votes
14
replies
10k
views
Answer: A: Dbsnp Individual Genotyping Information For Specific Snps
updated 5.8 years ago by 45k • written 14.5 years ago by 33k
3
votes
1
reply
13k
views
Answer: A: DNA composition - all k-mers and their frequency in some sequencing data
updated 5.8 years ago by 45k • written 9.9 years ago by 33k
1
vote
1
reply
13k
views
Comment: C: DNA composition - all k-mers and their frequency in some sequencing data
updated 5.8 years ago by 45k • written 9.9 years ago by 33k
1
vote
1
reply
13k
views
Comment: C: DNA composition - all k-mers and their frequency in some sequencing data
updated 5.8 years ago by 45k • written 9.9 years ago by 33k
2
votes
1
reply
3.2k
views
Answer: A: How to parse genebank file using swift for OSX ?
updated 5.9 years ago by 45k • written 9.9 years ago by 33k
10
votes
1
reply
5.4k
views
Answer: A: Why aren't Hamiltonian paths used in genome assembly?
updated 5.9 years ago by 45k • written 10.0 years ago by 33k
0
votes
1
reply
7.9k
views
Comment: C: Perl6 and the Future of Bioinformatics - Compatibility and Integration
updated 5.9 years ago by 45k • written 10.1 years ago by 33k
0
votes
1
reply
5.1k
views
Comment: Comment: New versions of Minia and DSK (2.0.x)
updated 3.5 years ago by 45k • written 10.6 years ago by 33k
1
vote
0
replies
7.6k
views
Comment: C: need to separate read1 and read2 to run tophat2
updated 5.9 years ago by 45k • written 10.8 years ago by 33k
28
votes
3
replies
37k
views
Answer: A: Why are we still using Bam files? And not Cram, HDF5 or improved Bam files?
updated 6.0 years ago by 45k • written 11.2 years ago by 33k
0
votes
0
replies
11k
views
Comment: C: Not having root access sucks; installing software without root privileges
updated 6.0 years ago by 45k • written 11.3 years ago by 33k
0
votes
0
replies
3.2k
views
Comment: C: How to make Bowtie 2 align the following reads as pairs?
updated 6.0 years ago by 45k • written 11.3 years ago by 33k
1
vote
1
reply
12k
views
Comment: C: Bowtie Vs Bwa For Indels
updated 6.0 years ago by 45k • written 11.5 years ago by 33k
7
votes
0
replies
12k
views
Answer: A: Bowtie Vs Bwa For Indels
updated 6.0 years ago by 45k • written 11.5 years ago by 33k
1
vote
0
replies
12k
views
Comment: C: Compare A Denovo Assembly To The Reference Genome
updated 6.0 years ago by 45k • written 11.8 years ago by 33k
2
votes
2
replies
12k
views
Answer: A: Compare A Denovo Assembly To The Reference Genome
updated 6.0 years ago by 45k • written 11.8 years ago by 33k
2
votes
0
replies
4.6k
views
Comment: C: How To Detect Chimeric Single End Reads With Galaxy?
updated 6.0 years ago by 45k • written 12.3 years ago by 33k
1
vote
0
replies
4.6k
views
Comment: C: How To Detect Chimeric Single End Reads With Galaxy?
updated 6.0 years ago by 45k • written 12.3 years ago by 33k
5
votes
1
reply
4.6k
views
Answer: A: Are Some Sequences Uniquely Mapped By Bwa When Mapped As Paired-End That Would N
updated 6.0 years ago by 45k • written 12.4 years ago by 33k
2
votes
1
reply
6.3k
views
Answer: A: Local Alignment Of Short Reads: Mosaik, Bowtie2, Bwa?
updated 6.0 years ago by 45k • written 12.4 years ago by 33k
6
votes
0
replies
9.3k
views
Answer: A: Distributed Computing In Bioinformatics
updated 6.0 years ago by 45k • written 12.5 years ago by 33k
3
votes
0
replies
16k
views
Comment: C: How To Align The Reference Sequence With The Contigs ?
updated 6.0 years ago by 45k • written 12.5 years ago by 33k
1,458 results • Page 1 of 30
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