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Comment: Comment: including samples for which group is unknown to help adjust for another variable
10 months ago by pilargmarch ▴ 110
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including samples for which group is unknown to help adjust for another variable
TCGA design RNA-Seq deseq2
updated 10 months ago by 4.2k • written 10 months ago by ▴ 110
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Comment: Comment: including samples for which group is unknown to help adjust for another variable
10 months ago by pilargmarch ▴ 110
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1.2k
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Answer: Answer: Matching gene-expression data with clinical data: best practices.
12 months ago by pilargmarch ▴ 110
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Answer: Answer: paired test for differential expression on RNAseq data
13 months ago by pilargmarch ▴ 110
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Answer: Answer: Mapping IDs and file names from TCGA datasets
13 months ago by pilargmarch ▴ 110
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Answer: Answer: TCGAbiolinks HT-Seq count
14 months ago by pilargmarch ▴ 110
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Answer: Answer: Biallelicly affected genes in pan cancer tcga data using cbioportal
14 months ago by pilargmarch ▴ 110
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Answer: Answer: cBioportal: Mutations in the database don't appear in the portal
14 months ago by pilargmarch ▴ 110
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Answer: Answer: Questions on analyzing TCGA proteome profiling data.
14 months ago by pilargmarch ▴ 110
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when do we need to normalize for GC-content and/or length bias in RNA-Seq reads?
gc-content normalization RNA-seq bias edaseq
updated 16 months ago by 43k • written 16 months ago by ▴ 110
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