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Comment:
Comment: including samples for which group is unknown to help adjust for another variable
11 months ago by
pilargmarch
▴ 110
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including samples for which group is unknown to help adjust for another variable
TCGA
design
RNA-Seq
deseq2
updated 11 months ago by
LauferVA
4.2k • written 11 months ago by
pilargmarch
▴ 110
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Comment:
Comment: including samples for which group is unknown to help adjust for another variable
11 months ago by
pilargmarch
▴ 110
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Answer:
Answer: Matching gene-expression data with clinical data: best practices.
13 months ago by
pilargmarch
▴ 110
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Answer:
Answer: paired test for differential expression on RNAseq data
14 months ago by
pilargmarch
▴ 110
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Answer:
Answer: Mapping IDs and file names from TCGA datasets
14 months ago by
pilargmarch
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Answer:
Answer: TCGAbiolinks HT-Seq count
14 months ago by
pilargmarch
▴ 110
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600
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Answer:
Answer: Biallelicly affected genes in pan cancer tcga data using cbioportal
15 months ago by
pilargmarch
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Answer:
Answer: cBioportal: Mutations in the database don't appear in the portal
15 months ago by
pilargmarch
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Answer:
Answer: Questions on analyzing TCGA proteome profiling data.
15 months ago by
pilargmarch
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when do we need to normalize for GC-content and/or length bias in RNA-Seq reads?
gc-content
normalization
RNA-seq
bias
edaseq
updated 16 months ago by
Ram
43k • written 17 months ago by
pilargmarch
▴ 110
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