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2
votes
2
replies
915
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how to use Hemtools bed2vcf?
vcf linux conversion bed
updated 2.3 years ago by 166k • written 2.3 years ago by ▴ 20
1
vote
1
reply
852
views
Why coordinate sort is required in sambamba depth?
linux samtools sambamba
updated 2.3 years ago by 166k • written 2.3 years ago by ▴ 20
0
votes
1
reply
1.0k
views
Comment: Comment: sambamba-depth: All files must be coordinate-sorted error?
2.3 years ago by MobiusT ▴ 20
2
votes
3
replies
1.0k
views
sambamba-depth: All files must be coordinate-sorted error?
read linux sambamba
updated 2.3 years ago by 166k • written 2.3 years ago by ▴ 20
0
votes
2
replies
1.1k
views
Samtools index and sambamba-depth error?
linux samtools sambamba
updated 2.2 years ago by 45k • written 2.3 years ago by ▴ 20
2
votes
4
replies
1.3k
views
Whole genome to whole exome data
whole-exome-sequencing whole-genome-sequencing
updated 2.4 years ago by 153k • written 2.4 years ago by ▴ 20
0
votes
2
replies
910
views
What is read depth exactly?
wgs wes
updated 2.6 years ago by 45k • written 2.6 years ago by ▴ 20
0
votes
0
replies
567
views
How to arrange local alignment to linear space?
linear-space local-alignment alignmnet
2.8 years ago by MobiusT ▴ 20
7
votes
2
replies
1.3k
views
How a fastq.gz file is formatted?
fastq nanopore sequence length
updated 3.1 years ago by 153k • written 3.1 years ago by ▴ 20
2
votes
1
reply
4.3k
views
How to use minimap2?
sequencing indexing minimap2 read-mapping
updated 3.2 years ago by 153k • written 3.2 years ago by ▴ 20
1
vote
2
replies
1.0k
views
What is the difference between fastq.gz and fastq.gz.len
dataset fastq sequencing
updated 3.1 years ago by 45k • written 3.2 years ago by ▴ 20
1
vote
1
reply
65k
views
Comment: Comment: How Can I Know The Length Of Mapped Reads From Bam File?
3.2 years ago by MobiusT ▴ 20
0
votes
0
replies
2.7k
views
Comment: Comment: How to find average read length and number of reads in a bam file using samtools
3.2 years ago by MobiusT ▴ 20
0
votes
2
replies
2.7k
views
How to find average read length and number of reads in a bam file using samtools in linux?
samtools bam
updated 2.2 years ago by 45k • written 3.2 years ago by ▴ 20
0
votes
1
reply
1.6k
views
Comment: Comment: Find mean read length of a vcf.gz file dataset of reads?
3.2 years ago by MobiusT ▴ 20
3
votes
5
replies
1.6k
views
Find mean read length of a bam file dataset of reads?
bam dataset read gz linux
updated 3.1 years ago by 45k • written 3.2 years ago by ▴ 20
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