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Answer: Answer: Output splicing for alignment with gff or gtf
3.7 years ago by Juke34 9.3k
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1
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6.7k
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Comment: Comment: Extract information from gtf file
3.8 years ago by Juke34 9.3k
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6.7k
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Comment: Comment: Extract information from gtf file
3.8 years ago by Juke34 9.3k
1
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6.7k
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Answer: Answer: Extract information from gtf file
3.8 years ago by Juke34 9.3k
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5.7k
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Comment: Comment: High duplicate BUSCOs after annotation but not assembly
3.8 years ago by Juke34 9.3k
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1.2k
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Answer: Answer: How extract a specific part of sequence from a gtf file?
3.8 years ago by Juke34 9.3k
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5.7k
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Comment: Comment: High duplicate BUSCOs after annotation but not assembly
3.8 years ago by Juke34 9.3k
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1
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5.7k
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Comment: Comment: High duplicate BUSCOs after annotation but not assembly
3.8 years ago by Juke34 9.3k
2
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1
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5.7k
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Comment: Comment: High duplicate BUSCOs after annotation but not assembly
3.8 years ago by Juke34 9.3k
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1
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2.5k
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Answer: Answer: How to solve Non-unique top level ID error in Maker annotation pipeline ?
3.8 years ago by Juke34 9.3k
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3.1k
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Comment: Comment: GFF3 TO GTF CONVERSION
3.8 years ago by Juke34 9.3k
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4.3k
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Comment: Comment: How to extract specific lines from a GTF file?
3.8 years ago by Juke34 9.3k
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1.2k
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Answer: Answer: Tools to compare genome annotations ?
3.9 years ago by Juke34 9.3k
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2.5k
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Comment: Comment: How to get the nucleotide sequence through ORF information?
3.9 years ago by Juke34 9.3k
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6.0k
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Comment: Comment: In 2022 is Perl and Ruby programming languages still useful for bioinformatics?
3.9 years ago by Juke34 9.3k
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6.0k
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Comment: Comment: In 2022 is Perl and Ruby programming languages still useful for bioinformatics?
3.9 years ago by Juke34 9.3k
3
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6.0k
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Answer: Answer: In 2022 is Perl and Ruby programming languages still useful for bioinformatics?
3.9 years ago by Juke34 9.3k
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1.1k
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Answer: Answer: Getting sequence from any fasta based on coordinates
3.9 years ago by Juke34 9.3k
1
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129k
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Comment: Comment: Convertion Of Gff3 To Gtf
3.6 years ago by Juke34 9.3k
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1.2k
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Comment: Comment: RNAEditingIndexer
3.9 years ago by Juke34 9.3k
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3.5k
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Answer: Answer: How to extract promoter sequences from rice transcriptome.gtf file ?
3.9 years ago by Juke34 9.3k
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13k
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Answer: Answer: Explanation of ENSEMBL GTF features
4.0 years ago by Juke34 9.3k
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13k
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Comment: Comment: Explanation of ENSEMBL GTF features
4.0 years ago by Juke34 9.3k
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3.4k
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Comment: Comment: Package conflicts installing AGAT
4.0 years ago by Juke34 9.3k
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1
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3.4k
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Comment: Comment: Package conflicts installing AGAT
4.0 years ago by Juke34 9.3k
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5.4k
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Comment: Comment: Simplify annotation file by collapsing gene isoforms into a single annotation pe
4.0 years ago by Juke34 9.3k
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2.4k
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Comment: Comment: Help for extraction of fasta sequences
4.0 years ago by Juke34 9.3k
1
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0
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1.8k
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Comment: Comment: Error in gff file
4.0 years ago by Juke34 9.3k
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1
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1.8k
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Comment: Comment: Error in gff file
4.0 years ago by Juke34 9.3k
1
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1
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1.8k
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Answer: Answer: Error in gff file
4.0 years ago by Juke34 9.3k
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0
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2.7k
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Answer: Answer: Running RepeatMasker with RepeatModeler database
4.0 years ago by Juke34 9.3k
0
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1
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949
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Overwrite Read sequences in bam with reads from Fastq
sam bam fastq
updated 4.1 years ago by 103k • written 4.1 years ago by 9.3k
2
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2.3k
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Answer: Answer: Courses in RNAseq data
4.1 years ago by Juke34 9.3k
1
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1
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3.7k
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Answer: Answer: Issues installing vep
4.1 years ago by Juke34 9.3k
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2.6k
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Comment: Comment: bedtools getfasta concatenating sequences
4.1 years ago by Juke34 9.3k
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1
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2.6k
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Comment: Comment: bedtools getfasta concatenating sequences
4.1 years ago by Juke34 9.3k
3
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2
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6.1k
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Answer: Answer: Are there any alternatives to Liftoff - Mapping annotations (GFF/GTF) between as
updated 21 months ago by 154k • written 4.2 years ago by 9.3k
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1.2k
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Answer: Answer: easy way to fetch out the surrounding CDS of a pair of given coordinates
4.2 years ago by Juke34 9.3k
3
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1
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8.4k
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Answer: Answer: Extracting exons and transcripts from gff3/gtf
4.2 years ago by Juke34 9.3k
0
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0
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4.5k
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Comment: Comment: gffread error
4.2 years ago by Juke34 9.3k
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1
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4.5k
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Answer: Answer: gffread error
4.2 years ago by Juke34 9.3k
1
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1
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1.1k
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Answer: Answer: Can the Non strand specify RNAseq data annotate genome?
4.2 years ago by Juke34 9.3k
2
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1
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6.1k
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Comment: Comment: Are there any alternatives to Liftoff - Mapping annotations (GFF/GTF) between as
4.2 years ago by Juke34 9.3k
1
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1
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6.1k
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Answer: Answer: Are there any alternatives to Liftoff - Mapping annotations (GFF/GTF) between as
4.2 years ago by Juke34 9.3k
1
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0
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1.8k
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Answer: Answer: "gt gff3 -sortlines -tidy -retainids" reduce some lines
4.2 years ago by Juke34 9.3k
0
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1
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5.0k
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Comment: Comment: snpeff : wont recognize the gtf or gff3 files (runtime exception)
4.2 years ago by Juke34 9.3k
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2
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5.0k
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Comment: Comment: snpeff : wont recognize the gtf or gff3 files (runtime exception)
4.2 years ago by Juke34 9.3k
1
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0
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3.3k
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Comment: Comment: Blank output When converting GFF3 file to GTF using either gffread or AGAT
4.2 years ago by Juke34 9.3k
3
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1
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3.3k
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Answer: Answer: Blank output When converting GFF3 file to GTF using either gffread or AGAT
4.2 years ago by Juke34 9.3k
1
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0
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3.5k
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Answer: Answer: Looking tools for genes annotation
4.2 years ago by Juke34 9.3k
1,001 results • Page 5 of 21
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