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587
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Count Matrix normalisation for downstream analysis and for creating heatmap of targeted genes
count-matrix
stringtie
normalisation
statistics
transcriptomics
updated 3 months ago by
Ram
43k • written 12 months ago by
Vikram
• 0
1
vote
1
reply
514
views
Featurecounts countmatrix creation
featurecounts
DEA
bamfile
updated 13 months ago by
rpolicastro
13k • written 13 months ago by
Vikram
• 0
0
votes
0
replies
322
views
Calculating Correlation between genes of different treatments
pearson-correlation
statistics
updated 12 months ago by
Ram
43k • written 13 months ago by
Vikram
• 0
1
vote
1
reply
606
views
FeatureCounts tool
GFF3
FeatureCounts
annotation
updated 13 months ago by
Istvan Albert
100k • written 13 months ago by
Vikram
• 0
0
votes
3
replies
891
views
In differential expression analysis using ballgown, how do we know that genes are upregulated or downregulated in control or treatment?
differential-expression-analysis
R
ballgown
updated 13 months ago by
ATpoint
82k • written 13 months ago by
Vikram
• 0
0
votes
1
reply
351
views
Ballgown
Ballgown
differential-expression-analysis
R
updated 13 months ago by
Ram
43k • written 13 months ago by
Vikram
• 0
0
votes
0
replies
352
views
correlation heatmap of RT-PCR data
RT-PCR
Correlation
Ct-value
heatmap
14 months ago by
Vikram
• 0
0
votes
2
replies
689
views
HISAT2
aligner
HISAT2
updated 14 months ago by
ATpoint
82k • written 14 months ago by
Vikram
• 0
0
votes
1
reply
459
views
differential expression analysis
RT-PCR
updated 15 months ago by
Ram
43k • written 15 months ago by
Vikram
• 0
1
vote
3
replies
598
views
Linux server Vs Linux pc
Linux
server
analysis
Transcriptomic
updated 15 months ago by
Joe
21k • written 15 months ago by
Vikram
• 0
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