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2
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0
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3.9k
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Answer: A: geneid.txt and knownGene.txt files in UCSC database to retrieve exon position in
updated 5.8 years ago by 45k • written 9.7 years ago by ▴ 210
0
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0
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3.9k
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Comment: C: geneid.txt and knownGene.txt files in UCSC database to retrieve exon position in
updated 5.8 years ago by 45k • written 9.7 years ago by ▴ 210
0
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1
reply
2.9k
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Comment: C: Calculation of PFBs for CNV analysis from 1000 Genomes data
updated 5.8 years ago by 45k • written 9.9 years ago by ▴ 210
0
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0
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3.2k
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Comment: Comment: Covert .BED file to probes.txt file ?
updated 3.7 years ago by 45k • written 11.0 years ago by ▴ 210
18
votes
5
replies
13k
views
bgzip all VCFs in a directory
sequencing seq
updated 6.5 years ago by 45k • written 10.2 years ago by ▴ 210
0
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1
reply
13k
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Comment: C: bgzip all VCFs in a directory
updated 6.5 years ago by 45k • written 10.2 years ago by ▴ 210
12
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7
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21k
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Annotate .bed file with gene names
Assembly next-gen genome
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 210
0
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0
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12k
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Comment: C: Cnv Calling Methods For The Illumina Omni2.5 - Penncnv And Quantisnp Possible?
9.9 years ago by stevenlang123 ▴ 210
2
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2
replies
2.3k
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Restrict ANNOVAR annotation to a list of genes.
genome next-gen sequencing
9.9 years ago by stevenlang123 ▴ 210
3
votes
1
reply
11k
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Negative P-Values
gene genome next-gen-sequencing
updated 3.1 years ago by 45k • written 10.1 years ago by ▴ 210
0
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0
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3.5k
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Comment: C: Next-generation DNA sequencing: How to tell systematic errors from real SNVs?
10.1 years ago by stevenlang123 ▴ 210
0
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0
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1.5k
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Impute missing GT based on AF ?
R SNP next-gen-sequencing
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 210
0
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0
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13k
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Comment: C: bgzip all VCFs in a directory
10.2 years ago by stevenlang123 ▴ 210
0
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1
reply
2.9k
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Comment: C: Recommendations on PLINK for CNV analysis
10.2 years ago by stevenlang123 ▴ 210
0
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0
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3.1k
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Comment: Comment: Extract variant positions from single sample VCFs prior to merging ?
updated 2.9 years ago by 45k • written 10.2 years ago by ▴ 210
0
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1
reply
3.1k
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Comment: Comment: Extract variant positions from single sample VCFs prior to merging ?
updated 2.9 years ago by 45k • written 10.2 years ago by ▴ 210
1
vote
5
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3.1k
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Extract variant positions from single sample VCFs prior to merging ?
sequencing SNP sequence
updated 2.9 years ago by 45k • written 10.2 years ago by ▴ 210
0
votes
0
replies
1.3k
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What percent of the exome are low complexity targets?
plink exome-sequencing
updated 2.9 years ago by 45k • written 10.2 years ago by ▴ 210
3
votes
1
reply
2.2k
views
Differential Methylation Interpretation
methylation epigenetics SNP next-gen-sequencing
updated 2.9 years ago by 45k • written 10.2 years ago by ▴ 210
22
votes
8
replies
31k
views
Input GSEA Pre-ranked list
gene next-gen RNA-Seq genome software
updated 2.8 years ago by 45k • written 10.2 years ago by ▴ 210
0
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0
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31k
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Comment: C: Input GSEA Pre-ranked list
10.2 years ago by stevenlang123 ▴ 210
0
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1
reply
31k
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Comment: C: Input GSEA Pre-ranked list
10.2 years ago by stevenlang123 ▴ 210
0
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0
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5.2k
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Answer: Answer: Cant find database of Transcription factors' binding site
updated 2.8 years ago by 45k • written 10.2 years ago by ▴ 210
0
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0
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12k
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Comment: Comment: Fastest Way To Rename Sample Name In 37 Gb Gzipped Vcf File Or Binary Ped File
updated 2.8 years ago by 45k • written 10.2 years ago by ▴ 210
0
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0
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5.8k
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Comment: Comment: Difference between a VCF file and a "genotype matrix" ?
updated 2.8 years ago by 45k • written 10.3 years ago by ▴ 210
6
votes
3
replies
5.8k
views
Difference between a VCF file and a "genotype matrix" ?
NGS sequencing SNP
updated 2.8 years ago by 45k • written 10.3 years ago by ▴ 210
0
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0
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5.8k
views
Comment: Comment: Difference between a VCF file and a "genotype matrix" ?
updated 2.8 years ago by 45k • written 10.3 years ago by ▴ 210
2
votes
3
replies
2.9k
views
Recommendations on PLINK for CNV analysis
plink genome next-gen
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 210
0
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0
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21k
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Comment: C: Annotate .bed file with gene names
10.9 years ago by stevenlang123 ▴ 210
0
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1
reply
3.2k
views
Comment: Comment: Covert .BED file to probes.txt file ?
updated 3.7 years ago by 45k • written 11.0 years ago by ▴ 210
3
votes
5
replies
3.2k
views
Covert .BED file to probes.txt file ?
next-gen sequencing
updated 3.7 years ago by 45k • written 11.0 years ago by ▴ 210
2
votes
3
replies
4.9k
views
Convert Rs# to .VCF file?
genome sequencing gene next-gen
updated 3.9 years ago by 45k • written 11.2 years ago by ▴ 210
0
votes
0
replies
2.2k
views
Are there any FBAT methods for working with CNV call data?
next-gen xhmm conifer CNV genome
updated 4.5 years ago by 45k • written 11.0 years ago by ▴ 210
0
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0
replies
4.9k
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Comment: Comment: Convert Rs# to .VCF file?
updated 3.9 years ago by 45k • written 11.2 years ago by ▴ 210
0
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0
replies
1.9k
views
Comment: Comment: pVAAST Complex Disease
updated 3.9 years ago by 45k • written 11.2 years ago by ▴ 210
0
votes
2
replies
1.9k
views
pVAAST Complex Disease
genome sequencing gene next-gen
updated 3.9 years ago by 45k • written 11.2 years ago by ▴ 210
0
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1
reply
4.0k
views
Comment: C: NGS Data from multiple families
11.2 years ago by stevenlang123 ▴ 210
11
votes
3
replies
4.0k
views
NGS Data from multiple families
sequencing SNP association GWAS next-gen
updated 3.9 years ago by 45k • written 11.2 years ago by ▴ 210
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