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Comment: Comment: GATK Mutect2 Input files reference and features have incompatible contigs: No ov
2.3 years ago by Manuel Sokolov Ravasqueira ▴ 110
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GATK Mutect2 Input files reference and features have incompatible contigs: No overlapping contigs found.
hg19 Mutect2 GATK Variant-Calling
updated 19 months ago by 45k • written 2.3 years ago by ▴ 110
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Comment: Comment: Should sorted bam files when processed have ordered chromossomes?
2.3 years ago by Manuel Sokolov Ravasqueira ▴ 110
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1.2k
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Comment: Comment: Should sorted bam files when processed have ordered chromossomes?
2.3 years ago by Manuel Sokolov Ravasqueira ▴ 110
5
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5
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1.2k
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Should sorted bam files when processed have ordered chromossomes?
BAM GATK MarkDuplicates
updated 2.3 years ago by 45k • written 2.3 years ago by ▴ 110
0
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0
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1.3k
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Comment: Comment: Filtering unmapped reads from BAM files
2.3 years ago by Manuel Sokolov Ravasqueira ▴ 110
6
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3
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1.4k
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Optimal Over Representation Analysis DE genes foldFC threshold?
ClusterProfiler ORA EnrichGo DGE
updated 2.3 years ago by 4.8k • written 2.3 years ago by ▴ 110
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1.3k
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Comment: Comment: Filtering unmapped reads from BAM files
2.3 years ago by Manuel Sokolov Ravasqueira ▴ 110
1
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4
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1.2k
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How to check if BAM file is result of ILLUMINA?
BAM ILLUMINA
updated 2.3 years ago by 154k • written 2.3 years ago by ▴ 110
1
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4
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1.3k
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Filtering unmapped reads from BAM files
BAM GATK
2.3 years ago by Manuel Sokolov Ravasqueira ▴ 110
0
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1
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1.2k
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Comment: Comment: How to check if BAM file is result of ILLUMINA?
2.3 years ago by Manuel Sokolov Ravasqueira ▴ 110
3
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1
reply
964
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Calculate TMB from BAM file
BAM GATK TMB
updated 2.3 years ago by ★ 1.9k • written 2.3 years ago by ▴ 110
4
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1
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1.2k
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How to Load a Molecular Signature Database into clusterProfiler gseGO?
ClusterProfiler RNA-seq GSEA
updated 2.3 years ago by ★ 1.7k • written 2.3 years ago by ▴ 110
7
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2
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1.6k
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How to transform rownames of a RNA Seq dataset with gene names to ENSG format?
GeneID RNA-seq Ensembl GSEA
updated 2.3 years ago by ▴ 150 • written 2.3 years ago by ▴ 110
64 results • Page 2 of 2
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