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ERROR: Duplicate entry "..." in sam header; samtools view: failed to add PG line to the header
sort.
SAMtools.
BAM.
SAM.
updated 12 days ago by
GenoMax
142k • written 12 days ago by
Sony
▴ 10
2
votes
4
replies
467
views
Which command ro run MAKER pipeline for gene annotation ?
run.
command
to
MAKERpipeline.
updated 4 weeks ago by
GenoMax
142k • written 5 weeks ago by
Sony
▴ 10
3
votes
4
replies
435
views
How to download large-scale cDNA sequences from NCBI effectively ?
NCBI.
cDNA
updated 5 weeks ago by
Pierre Lindenbaum
161k • written 5 weeks ago by
Sony
▴ 10
0
votes
5
replies
373
views
BUSCO analysis failed due to Duplicate of sequence in Input genome fasta. How to solve this problem ?
duplicate
BUSCO.
updated 6 weeks ago by
GenoMax
142k • written 6 weeks ago by
Sony
▴ 10
0
votes
1
reply
195
views
How to perform GO enrichment analysis for assembled sequence ?
GO-enrichment
Gene-Ontology
updated 7 weeks ago by
Ram
43k • written 7 weeks ago by
Sony
▴ 10
1
vote
3
replies
359
views
How to validate the assembly completeness of unaligned reads ?
MaSuRCA
SPAdes
updated 8 weeks ago by
GenoMax
142k • written 8 weeks ago by
Sony
▴ 10
0
votes
0
replies
153
views
compare the assembler MaSuRCA and SPAdes for assembly unmapped reads
SPAdes
unmapped_reads.
assembly.
MaSuRCA.
9 weeks ago by
Sony
▴ 10
2
votes
3
replies
487
views
How to download all expressed sequence tags (ESTs) for particular species from NCBI using command ?
NCBI
EST
updated 10 weeks ago by
GenoMax
142k • written 10 weeks ago by
Sony
▴ 10
0
votes
1
reply
271
views
Validate the assembly of unmapped reads by remapping the original reads back to the assembled sequence
unmapped_reads.
assembly.
Paired-end_reads
updated 12 weeks ago by
GenoMax
142k • written 12 weeks ago by
Sony
▴ 10
1
vote
5
replies
678
views
How to calculate insert size and Stdev of insert file for Configure file of MaSuRCA assembly ?
MaSuRCA
insert-size
assembly
updated 3 months ago by
Ram
43k • written 3 months ago by
Sony
▴ 10
3
votes
5
replies
559
views
How to assess the quality of the assembly of unmapped reads ?
Pangenome
Iterative-assembly
3 months ago by
Sony
▴ 10
8
votes
3
replies
452
views
How to construct a blast database for non-green plant species and fungi
blast
updated 4 months ago by
GenoMax
142k • written 4 months ago by
Sony
▴ 10
8
votes
12
replies
1.3k
views
download BLAST NCBI nt database
blast
nt
updated 4 months ago by
PeterC_NCBI
▴ 410 • written 4 months ago by
Sony
▴ 10
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