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Comment: Comment: IGV signal visualization, low and high signals
14 months ago by Orange ▴ 30
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IGV signal visualization, low and high signals
ATAC-seq IGV
updated 14 months ago by 102k • written 14 months ago by ▴ 30
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387
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GSEA for ChIP/ATAC-seq
ATAC-seq GSEA
16 months ago by Orange ▴ 30
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1.1k
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Method of combining replicate data for signal track visualization
ATAC-seq UCSC IGV
updated 16 months ago by ★ 1.7k • written 16 months ago by ▴ 30
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DiffBind dba.contrast with design and/or categories parameters
ATAC DiffBind
updated 16 months ago by 151k • written 16 months ago by ▴ 30
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Answer: Answer: DiffBind dba.contrast with design and/or categories parameters
16 months ago by Orange ▴ 30
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Comment: Comment: Use of IDR after running MACS3 for ATAC-seq data
17 months ago by Orange ▴ 30
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Use of IDR after running MACS3 for ATAC-seq data
ATAC-seq MACS2 MACS3
17 months ago by Orange ▴ 30
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1.3k
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Comment: Comment: Selecting a subset of MSigDB database for GSEA
18 months ago by Orange ▴ 30
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3
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1.3k
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Selecting a subset of MSigDB database for GSEA
fgsea clusterprofiler GSEA
18 months ago by Orange ▴ 30
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Comment: Comment: Bulk RNAseq Salmon index building which transcriptome to use
18 months ago by Orange ▴ 30
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Bulk RNAseq Salmon index building which transcriptome to use
Salmon RNA-seq
18 months ago by Orange ▴ 30
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