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Comment: Comment: IGV signal visualization, low and high signals
19 months ago by Orange ▴ 30
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IGV signal visualization, low and high signals
ATAC-seq IGV
updated 18 months ago by 103k • written 19 months ago by ▴ 30
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432
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GSEA for ChIP/ATAC-seq
ATAC-seq GSEA
20 months ago by Orange ▴ 30
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2
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1.5k
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Method of combining replicate data for signal track visualization
ATAC-seq UCSC IGV
updated 20 months ago by ★ 1.8k • written 20 months ago by ▴ 30
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DiffBind dba.contrast with design and/or categories parameters
ATAC DiffBind
updated 20 months ago by 153k • written 21 months ago by ▴ 30
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Answer: Answer: DiffBind dba.contrast with design and/or categories parameters
20 months ago by Orange ▴ 30
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Comment: Comment: Use of IDR after running MACS3 for ATAC-seq data
21 months ago by Orange ▴ 30
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Use of IDR after running MACS3 for ATAC-seq data
ATAC-seq MACS2 MACS3
21 months ago by Orange ▴ 30
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1.6k
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Comment: Comment: Selecting a subset of MSigDB database for GSEA
22 months ago by Orange ▴ 30
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3
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1.6k
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Selecting a subset of MSigDB database for GSEA
fgsea clusterprofiler GSEA
22 months ago by Orange ▴ 30
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Comment: Comment: Bulk RNAseq Salmon index building which transcriptome to use
22 months ago by Orange ▴ 30
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2
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Bulk RNAseq Salmon index building which transcriptome to use
Salmon RNA-seq
22 months ago by Orange ▴ 30
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