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dittoHeapmap didn't work in my data set(error code :Error in .subscript.2ary(x, i, j, drop = TRUE) : subscript out of bounds)
dittoseq scRNAseq
updated 7 days ago by 87k • written 8 days ago by ▴ 20
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171
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Error: All provided root_pr_nodes must be present in the principal graph. error in monocle3
monocle3 scRNAseq
7 weeks ago by kayah ▴ 20
4
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14
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4.2k
views
7 follow
Is there anyone who downloaded Azimuth packges?
Azimuth scRNAseq
updated 4 months ago by 87k • written 13 months ago by ▴ 20
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1
reply
495
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find marker using scRNAseq data
scRNAseq biomarker
updated 5 months ago by ▴ 40 • written 7 months ago by ▴ 20
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645
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Comment: Comment: Find DE in single cell RNA sequencing
7 months ago by kayah ▴ 20
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2
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645
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Find DE in single cell RNA sequencing
DE DESeq2 scRNAseq analysis
7 months ago by kayah ▴ 20
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0
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581
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Comment: Comment: CCA integration
7 months ago by kayah ▴ 20
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2
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581
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CCA integration
single-cell scRNA-seq batch-correction
7 months ago by kayah ▴ 20
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0
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891
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Comment: Comment: I think batch correction didn't working in my dataset(ft. RunHarmony)
7 months ago by kayah ▴ 20
3
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3
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891
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I think batch correction didn't working in my dataset(ft. RunHarmony)
scRNAseq
7 months ago by kayah ▴ 20
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1
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1.2k
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Comment: Comment: normalization in single cell
8 months ago by kayah ▴ 20
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1
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1.2k
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Comment: Comment: normalization in single cell
8 months ago by kayah ▴ 20
3
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6
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1.2k
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normalization in single cell
normalization scRNA-seq single-cell
updated 8 months ago by 6.2k • written 8 months ago by ▴ 20
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1
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1.2k
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Comment: Comment: normalization in single cell
8 months ago by kayah ▴ 20
4
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3
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692
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single cell RNA sequencing and mitochondrial percent
mitochondria scRNAseq
updated 9 months ago by ★ 1.3k • written 9 months ago by ▴ 20
1
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1
reply
779
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Cell type classification using an integrated reference
scRNAseq
updated 12 months ago by ★ 3.1k • written 12 months ago by ▴ 20
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2
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2.1k
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Comment: Comment: FindAllMarkers not working (Error (data layers are not joined. Please run JoinL
updated 13 months ago by 45k • written 13 months ago by ▴ 20
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511
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Comment: Comment: Is it possible to see so little adipocyte in white adipose tissue?
13 months ago by kayah ▴ 20
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0
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510
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Comment: Comment: singlecell annotation
13 months ago by kayah ▴ 20
1
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2
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511
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Is it possible to see so little adipocyte in white adipose tissue?
scRNA-seq
13 months ago by kayah ▴ 20
2
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2
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510
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singlecell annotation
scRNA-seq annotation
13 months ago by kayah ▴ 20
0
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0
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604
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Comment: Comment: compare dimplot(single cell)
13 months ago by kayah ▴ 20
2
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2
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604
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compare dimplot(single cell)
DEG scRNAseq
13 months ago by kayah ▴ 20
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1
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4.2k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
13 months ago by kayah ▴ 20
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1
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4.2k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
13 months ago by kayah ▴ 20
0
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1
reply
955
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Comment: Comment: how to convert SummarizedExperiment files to DESeqDataSet??
13 months ago by kayah ▴ 20
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1
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955
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Comment: Comment: how to convert SummarizedExperiment files to DESeqDataSet??
13 months ago by kayah ▴ 20
1
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5
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955
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how to convert SummarizedExperiment files to DESeqDataSet??
scRNA-seq DEG DESeq2
updated 13 months ago by ▴ 730 • written 13 months ago by ▴ 20
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488
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Comment: Comment: Analyzing scRNA seq data and want to analyze it's DEG with DESeq2
13 months ago by kayah ▴ 20
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1
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488
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Analyzing scRNA seq data and want to analyze it's DEG with DESeq2
scRNA-seq DEG DESeq2
13 months ago by kayah ▴ 20
0
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0
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1.0k
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Comment: Comment: single cell RNA seq integration(Error in UseMethod(generic = "as.sparse", object
13 months ago by kayah ▴ 20
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1
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1.0k
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Comment: Comment: single cell RNA seq integration(Error in UseMethod(generic = "as.sparse", object
13 months ago by kayah ▴ 20
0
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0
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1.0k
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Comment: Comment: single cell RNA seq integration(Error in UseMethod(generic = "as.sparse", object
13 months ago by kayah ▴ 20
2
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6
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1.0k
views
single cell RNA seq integration(Error in UseMethod(generic = "as.sparse", object = x))
scRNA-seq
13 months ago by kayah ▴ 20
3
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3
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950
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How to analyze DEGs in scRNA-seq data?
DEG single-cell scRNA-seq rna-seq
updated 13 months ago by 45k • written 13 months ago by ▴ 20
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0
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950
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Comment: Comment: single cell rna seq-how to DEG analyze??(full code & Dimplot added)
13 months ago by kayah ▴ 20
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2
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1.1k
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Comment: Comment: scRNA-seq analysis
updated 14 months ago by 45k • written 14 months ago by ▴ 20
4
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7
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1.1k
views
scRNA-seq analysis
scRNA-seq
updated 14 months ago by ★ 18k • written 14 months ago by ▴ 20
0
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1
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1.1k
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Comment: Comment: scRNA-seq analysis
updated 14 months ago by 45k • written 14 months ago by ▴ 20
0
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0
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1.1k
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Comment: Comment: how to start DEG analysis after featurecounts
15 months ago by kayah ▴ 20
0
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1
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1.1k
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Comment: Comment: how to start DEG analysis after featurecounts
15 months ago by kayah ▴ 20
0
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5
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1.1k
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how to start DEG analysis after featurecounts
RNAseq DEG
15 months ago by kayah ▴ 20
0
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1
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1.1k
views
Comment: Comment: how to start DEG analysis after featurecounts
15 months ago by kayah ▴ 20
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