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Plotting the control-FREEC data
control-FREEC CNVs
updated 14 months ago by ▴ 30 • written 16 months ago by • 0
0
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1
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2.1k
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Comment: Comment: How to generate an oncoplot with most frequently mutated genes using maftools wi
17 months ago by sainavyav22 • 0
0
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1
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2.1k
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Comment: Comment: How to generate an oncoplot with most frequently mutated genes using maftools wi
17 months ago by sainavyav22 • 0
0
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1
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2.1k
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Comment: Comment: How to generate an oncoplot with most frequently mutated genes using maftools wi
updated 17 months ago by 45k • written 17 months ago by • 0
0
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0
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937
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Comment: Comment: Help with CNA analysis using control-FREEC
17 months ago by sainavyav22 • 0
0
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1
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937
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Comment: Comment: Help with CNA analysis using control-FREEC
17 months ago by sainavyav22 • 0
0
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4
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937
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Help with CNA analysis using control-FREEC
CNA control-FREEC
17 months ago by sainavyav22 • 0
0
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7
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2.1k
views
How to generate an oncoplot with most frequently mutated genes using maftools with annovar annotated output files
oncoplot Maftools Annovar
updated 17 months ago by 45k • written 18 months ago by • 0
0
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0
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1.0k
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Comment: Comment: How to generate an Upset plot in R to plot the shared variants between cell free
18 months ago by sainavyav22 • 0
0
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2
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1.0k
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How to generate an Upset plot in R to plot the shared variants between cell free DNA samples
r Upset
18 months ago by sainavyav22 • 0
0
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0
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470
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Use of ichor CNA
Dog CNA genome
18 months ago by sainavyav22 • 0
0
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0
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727
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Comment: Comment: Presence of unknown sites in ANNOVAR output file
updated 18 months ago by 45k • written 18 months ago by • 0
0
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2
replies
727
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Presence of unknown sites in ANNOVAR output file
ANNOVAR
updated 18 months ago by 45k • written 18 months ago by • 0
0
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0
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954
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Comment: Comment: Help with generating annotation database for dog genome to use in ANNOVAR for v
18 months ago by sainavyav22 • 0
0
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0
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846
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Comment: Comment: Help with Base quality Score Recalibration (BQSR) using GATK
19 months ago by sainavyav22 • 0
0
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2
replies
846
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Help with Base quality Score Recalibration (BQSR) using GATK
GATK BQSR
19 months ago by sainavyav22 • 0
0
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0
replies
468
views
How to extract the mutations specific to cancer after variant annotation
variant-annotation
updated 19 months ago by 45k • written 19 months ago by • 0
0
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2
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954
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Help with generating annotation database for dog genome to use in ANNOVAR for variant annotation of dog tumor sequences
ANNOVAR
18 months ago by sainavyav22 • 0
0
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1
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2.5k
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Comment: Comment: Reference Guided genome assembly
21 months ago by sainavyav22 • 0
0
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1
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2.5k
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Comment: Comment: Reference Guided genome assembly
21 months ago by sainavyav22 • 0
0
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0
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2.5k
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Comment: Comment: Reference Guided genome assembly
21 months ago by sainavyav22 • 0
2
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11
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2.5k
views
Reference Guided genome assembly
tabix
updated 21 months ago by 56k • written 21 months ago by • 0
0
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3
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2.5k
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Comment: Comment: Reference Guided genome assembly
updated 21 months ago by 45k • written 21 months ago by • 0
0
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0
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915
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Comment: Comment: Help with ABySS use
22 months ago by sainavyav22 • 0
0
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1
reply
915
views
Comment: Comment: Help with ABySS use
22 months ago by sainavyav22 • 0
0
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4
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915
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Help with ABySS use
ABySS
22 months ago by sainavyav22 • 0
0
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0
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955
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Comment: Comment: Error in running Abyss assembler for chicken genome assembly
22 months ago by sainavyav22 • 0
0
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0
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1.3k
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Comment: Comment: Trimmomatic - To trim the low quality reads
22 months ago by sainavyav22 • 0
0
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1
reply
1.3k
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Comment: Comment: Trimmomatic - To trim the low quality reads
22 months ago by sainavyav22 • 0
0
votes
1
reply
1.3k
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Comment: Comment: Trimmomatic - To trim the low quality reads
updated 22 months ago by 154k • written 22 months ago by • 0
0
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6
replies
1.3k
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Trimmomatic - To trim the low quality reads
Trimmomatic
22 months ago by sainavyav22 • 0
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