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1
vote
4
replies
1.1k
views
Variant calling from RNASeq
RNA-Seq SNP
4.7 years ago by ifudontmind_plzz ▴ 200
0
votes
6
replies
1.5k
views
Annotating Agilent micro array probe sequence with gene
Assembly genome gene
5.7 years ago by ifudontmind_plzz ▴ 200
3
votes
2
replies
3.8k
views
realign bam files using bwa
alignment sequencing R
updated 2.5 years ago by 45k • written 9.9 years ago by ▴ 200
6
votes
8
replies
6.7k
views
How to get mouse-human homologues table from UCSC?
genome gene alignment sequence
updated 2.4 years ago by 45k • written 9.9 years ago by ▴ 200
5
votes
6
replies
9.3k
views
length of quality sequence and length of read do not match in fastq
sequencing alignment next-gen
updated 9.2 years ago by ★ 2.1k • written 9.2 years ago by ▴ 200
9
votes
7
replies
11k
views
download all samples from a study in BioProject
sequencing sra
updated 2.7 years ago by 45k • written 9.6 years ago by ▴ 200
2
votes
6
replies
4.0k
views
How to compare the correlation between the RNAseq data from human and mouse tumor?
RNA-Seq
updated 2.7 years ago by 45k • written 9.6 years ago by ▴ 200
2
votes
1
reply
2.4k
views
How to normalize RNAseq raw read counts with out control?
RNA-Seq R
updated 2.7 years ago by 45k • written 9.7 years ago by ▴ 200
1
vote
1
reply
2.3k
views
Compare RNAseq data and find correlation between studies
RNA-Seq TCGA
updated 2.8 years ago by 45k • written 9.7 years ago by ▴ 200
3
votes
1
reply
1.8k
views
How to include each steps in the bam header
Assembly sequencing
updated 2.6 years ago by 45k • written 9.8 years ago by ▴ 200
3
votes
6
replies
2.7k
views
copy number profiling from shallow sequenzing or whole genome low coverage seq for mouse genome
next-gen-sequencing
updated 2.3 years ago by 45k • written 10.0 years ago by ▴ 200
32
votes
10
replies
15k
views
8 follow
How to annotate gene names for genomic coordinates?
next-gen genome R
updated 2.4 years ago by 45k • written 9.9 years ago by ▴ 200
1
vote
2
replies
3.6k
views
mouse mm10 supporting file for GISTIC 2.0
GISTIC2.0
updated 2.4 years ago by 45k • written 9.9 years ago by ▴ 200
8
votes
7
replies
4.2k
views
merge multpile bam files for unique samples
alignment R
updated 2.4 years ago by 45k • written 9.9 years ago by ▴ 200
2
votes
5
replies
3.0k
views
Best practice to identify Copy number alteration from mouse whole genome low coverage sequencing study
next-gen-sequencing
updated 2.3 years ago by 45k • written 10.3 years ago by ▴ 200
0
votes
7
replies
3.3k
views
script to run CrossMap for a set of bam files
genome Assembly R
updated 3.0 years ago by 45k • written 10.2 years ago by ▴ 200
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