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Comment: C: pathway or network from DEG list tool (plant)
3.7 years ago by manekineko ▴ 150
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1.1k
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Comment: C: pathway or network from DEG list tool (plant)
3.7 years ago by manekineko ▴ 150
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1.5k
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Comment: C: Collapsing BAM based on seq and positions
4.2 years ago by manekineko ▴ 150
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1
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1.5k
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Comment: C: Collapsing BAM based on seq and positions
4.2 years ago by manekineko ▴ 150
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1
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1.5k
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Comment: A: Collapsing BAM based on seq and positions
4.2 years ago by manekineko ▴ 150
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2
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6.7k
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Comment: A: Do you need a deduplication tool for FASTQ data in fastp?
4.3 years ago by manekineko ▴ 150
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1
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4.8k
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Comment: C: Problems with STAR mapping output
updated 4.5 years ago by 43k • written 8.8 years ago by ▴ 150
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4.3k
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Comment: C: htseq-count not working with miRbase gff?
updated 4.5 years ago by 43k • written 8.8 years ago by ▴ 150
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1.6k
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Comment: C: miRNAs differential expression with no replicates
updated 4.5 years ago by 43k • written 8.8 years ago by ▴ 150
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1
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8.5k
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Comment: C: Mirna-Seq Trimming And Mapping?
updated 4.5 years ago by 43k • written 8.8 years ago by ▴ 150
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1
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8.5k
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Comment: C: Mirna-Seq Trimming And Mapping?
updated 4.5 years ago by 43k • written 8.8 years ago by ▴ 150
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1
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8.5k
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Comment: C: Mirna-Seq Trimming And Mapping?
updated 4.5 years ago by 43k • written 8.8 years ago by ▴ 150
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2.1k
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Comment: C: Early Stage Researcher (with PhD option) - Bioinformatics (Marie-Curie Actions H
5.8 years ago by manekineko ▴ 150
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1
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2.5k
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Comment: C: LoFreq outputing no SNP?
6.4 years ago by manekineko ▴ 150
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2.5k
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Comment: C: LoFreq outputing no SNP?
6.4 years ago by manekineko ▴ 150
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1
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2.5k
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Comment: C: LoFreq outputing no SNP?
6.4 years ago by manekineko ▴ 150
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1
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1.2k
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Comment: C: Help downloading pepper genome (I have bad speed connection)
6.4 years ago by manekineko ▴ 150
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0
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1.9k
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Comment: C: Uncollapsing FASTA file
6.5 years ago by manekineko ▴ 150
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0
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1.9k
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Comment: C: Uncollapsing FASTA file
6.5 years ago by manekineko ▴ 150
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2
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1.9k
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Comment: C: Uncollapsing FASTA file
6.5 years ago by manekineko ▴ 150
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0
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2.8k
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Comment: C: Very slow Bio-linux on VirtualBox?
7.9 years ago by manekineko ▴ 150
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1
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3.1k
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Comment: C: 16s amplicon metagenomics - no mapping file?
8.0 years ago by manekineko ▴ 150
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2.7k
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Comment: Comment: Suggestions for small tools to add to Galaxy
updated 18 months ago by 43k • written 8.7 years ago by ▴ 150
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1
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2.6k
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Comment: C: Statistical question (Deseq, Cuffdis) when one condition is zero?
8.7 years ago by manekineko ▴ 150
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1
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2.6k
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Comment: Comment: Strange mapping on miRNAs from RNA-seq library
updated 18 months ago by 43k • written 8.7 years ago by ▴ 150
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1
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2.6k
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Comment: Comment: Strange mapping on miRNAs from RNA-seq library
updated 18 months ago by 43k • written 8.7 years ago by ▴ 150
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0
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2.6k
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Comment: Comment: Strange mapping on miRNAs from RNA-seq library
updated 18 months ago by 43k • written 8.7 years ago by ▴ 150
0
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2
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2.6k
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Comment: Comment: Strange mapping on miRNAs from RNA-seq library
updated 18 months ago by 43k • written 8.7 years ago by ▴ 150
0
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1
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2.6k
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Comment: C: Strange mapping on miRNAs from RNA-seq library
8.7 years ago by manekineko ▴ 150
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1
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2.2k
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Comment: C: Tophat mapping less reads (and less properly paired) when more real -r is specif
8.8 years ago by manekineko ▴ 150
0
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1
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2.2k
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Comment: C: Tophat mapping less reads (and less properly paired) when more real -r is specif
8.8 years ago by manekineko ▴ 150
0
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0
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2.2k
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Comment: C: Tophat mapping less reads (and less properly paired) when more real -r is specif
8.8 years ago by manekineko ▴ 150
0
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1
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5.1k
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Comment: C: Mean insert size and Mean inner distance between mate pairs
8.8 years ago by manekineko ▴ 150
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2.5k
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Comment: Comment: Check is RNA-seq mapping (tophat) is performed ok (hg38)?
updated 18 months ago by 43k • written 8.8 years ago by ▴ 150
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2.5k
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Comment: Comment: Check is RNA-seq mapping (tophat) is performed ok (hg38)?
updated 18 months ago by 43k • written 8.8 years ago by ▴ 150
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1
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6.2k
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Comment: C: multiple paired-end files for one sample?
8.8 years ago by manekineko ▴ 150
0
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1
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6.2k
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Comment: C: multiple paired-end files for one sample?
8.8 years ago by manekineko ▴ 150
0
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1
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4.3k
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Comment: C: htseq-count not working with miRbase gff?
8.8 years ago by manekineko ▴ 150
0
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1
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4.3k
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Comment: A: htseq-count not working with miRbase gff?
8.8 years ago by manekineko ▴ 150
0
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1
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4.3k
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Comment: Comment: htseq-count not working with miRbase gff?
updated 17 months ago by 43k • written 8.8 years ago by ▴ 150
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0
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3.5k
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Comment: C: bowtie options for exact match with reference short sequence
8.8 years ago by manekineko ▴ 150
1
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0
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30k
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Comment: Comment: Merge Paired-End Reads
updated 17 months ago by 43k • written 8.8 years ago by ▴ 150
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1
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8.5k
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Comment: Comment: Mirna-Seq Trimming And Mapping?
updated 17 months ago by 43k • written 8.8 years ago by ▴ 150
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1
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7.2k
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Comment: C: Removing barcode and adapters?
8.8 years ago by manekineko ▴ 150
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2.3k
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Comment: Comment: htseq-count counts all reads as no_feature
updated 16 months ago by 43k • written 8.8 years ago by ▴ 150
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1
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1.2k
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Comment: C: Way to check if there is local trimmed alihned reads BOWTIE2
8.8 years ago by manekineko ▴ 150
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1
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4.4k
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Comment: C: Very short reads (20-22) , bowtie and tophat not doing gapped alignment
8.8 years ago by manekineko ▴ 150
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3.6k
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Comment: C: low % of read map to mirase mature miRNAs
8.8 years ago by manekineko ▴ 150
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0
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3.6k
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Comment: C: low % of read map to mirase mature miRNAs
8.8 years ago by manekineko ▴ 150
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1
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2.3k
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Comment: Comment: htseq-count counts all reads as no_feature
updated 16 months ago by 43k • written 8.8 years ago by ▴ 150
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