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Comment: C: RNASeq data: STAR low alignment score
3.7 years ago by brunobsouzaa ▴ 830
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2.6k
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Comment: C: Merging BAM vs concatenate FASTQ
3.7 years ago by brunobsouzaa ▴ 830
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12k
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Comment: Comment: How to count SNPs, InDels
updated 18 months ago by 43k • written 3.7 years ago by ▴ 830
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819
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Comment: C: Generate .bed file with exon and intron indices
3.8 years ago by brunobsouzaa ▴ 830
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928
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Comment: C: online link for SNP genotype frequency calculations
3.8 years ago by brunobsouzaa ▴ 830
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0
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11k
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Comment: C: Run Fastqc from terminal
3.8 years ago by brunobsouzaa ▴ 830
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1
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2.0k
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Comment: C: Database for germline mutations
3.8 years ago by brunobsouzaa ▴ 830
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2.0k
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Comment: C: Database for germline mutations
3.8 years ago by brunobsouzaa ▴ 830
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1.1k
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Comment: C: GATK variant calling
3.8 years ago by brunobsouzaa ▴ 830
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1
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1.1k
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Comment: C: GATK variant calling
3.8 years ago by brunobsouzaa ▴ 830
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4.4k
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Comment: C: How to analyze Illumina RNASeq data
3.8 years ago by brunobsouzaa ▴ 830
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2.7k
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Comment: C: How to download seqret method in Linux?
3.8 years ago by brunobsouzaa ▴ 830
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2.5k
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Comment: C: Noisy germline CNV data using CNVKit
3.8 years ago by brunobsouzaa ▴ 830
4
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1
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4.4k
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Answer: A: How to analyze Illumina RNASeq data
3.8 years ago by brunobsouzaa ▴ 830
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1
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1.1k
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Comment: C: How to annotate variants offline using ANNOVAR?
3.8 years ago by brunobsouzaa ▴ 830
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1
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1.1k
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Answer: C: How to annotate variants offline using ANNOVAR?
3.8 years ago by brunobsouzaa ▴ 830
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1
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6.2k
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Comment: C: ACMG assignment tools
3.8 years ago by brunobsouzaa ▴ 830
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1
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821
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Question on Bonferroni correction
P-values bonferroni
3.9 years ago by brunobsouzaa ▴ 830
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0
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1.1k
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Comment: C: Help with my differential expression analysis (homework)
3.9 years ago by brunobsouzaa ▴ 830
1
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1
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1.1k
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Comment: C: Help with my differential expression analysis (homework)
3.9 years ago by brunobsouzaa ▴ 830
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0
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1.4k
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Comment: C: cnvkit Error message "length of weights should be the same as the number of prob
3.9 years ago by brunobsouzaa ▴ 830
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0
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2.6k
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Comment: C: Interval list for GATK tool Haplotype Caller
3.9 years ago by brunobsouzaa ▴ 830
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2
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4.0k
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Answer: A: Converting SNPs from hg19 to hg38
4.0 years ago by brunobsouzaa ▴ 830
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1
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1.0k
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Answer: A: local ancestry in admixed populations
4.0 years ago by brunobsouzaa ▴ 830
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0
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679
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Answer: A: How to generate a bed file from X:21915521-21918496 list
4.0 years ago by brunobsouzaa ▴ 830
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0
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974
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Answer: A: How can get overlap size in bedtools multi-intersect?
4.0 years ago by brunobsouzaa ▴ 830
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1
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4.2k
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Comment: C: Error: Could not find or load main class -Xmx4g
4.1 years ago by brunobsouzaa ▴ 830
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0
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1.8k
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Comment: C: How do you know the best segments in cnvkit after filtering?
4.1 years ago by brunobsouzaa ▴ 830
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0
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1.7k
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Comment: A: Reading a tab separated file
4.1 years ago by brunobsouzaa ▴ 830
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1
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4.2k
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Comment: A: Error: Could not find or load main class -Xmx4g
4.1 years ago by brunobsouzaa ▴ 830
0
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0
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2.9k
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Comment: A: from BAM to BED passing cell barcodes
4.1 years ago by brunobsouzaa ▴ 830
1
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0
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679
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Answer: A: reading a big file in R
4.1 years ago by brunobsouzaa ▴ 830
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0
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892
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Answer: A: DIFFICULTY INSTALLING JASS
4.1 years ago by brunobsouzaa ▴ 830
2
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970
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Answer: A: Comparing variants in family trios in Python
4.1 years ago by brunobsouzaa ▴ 830
2
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0
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763
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Answer: A: performing PCA by R
4.1 years ago by brunobsouzaa ▴ 830
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1
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1.8k
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Answer: A: How do you know the best segments in cnvkit after filtering?
4.1 years ago by brunobsouzaa ▴ 830
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0
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3.0k
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Comment: C: BWA mem giving malformed SAM headers.
4.1 years ago by brunobsouzaa ▴ 830
1
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0
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2.1k
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Answer: A: BWA .alt index file
4.1 years ago by brunobsouzaa ▴ 830
0
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0
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3.0k
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Answer: A: BWA mem giving malformed SAM headers.
4.1 years ago by brunobsouzaa ▴ 830
3
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0
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1.3k
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Answer: A: how to do normalization in edgeR
4.1 years ago by brunobsouzaa ▴ 830
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1
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2.9k
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Comment: C: ExomeDepth failure to run
4.3 years ago by brunobsouzaa ▴ 830
0
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0
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3.7k
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Comment: C: using GNU parallel for bwa mem and samtools
4.4 years ago by brunobsouzaa ▴ 830
1
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2
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2.9k
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Comment: C: ExomeDepth failure to run
4.4 years ago by brunobsouzaa ▴ 830
2
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0
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813
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Germline indels not detected by strelka2 and samtools/VarScan
next-gen
4.6 years ago by brunobsouzaa ▴ 830
1
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0
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2.2k
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Comment: A: removing duplicate sequences while extarcting the reads from fastq.gz
4.7 years ago by brunobsouzaa ▴ 830
2
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1
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2.5k
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Answer: A: Noisy germline CNV data using CNVKit
4.7 years ago by brunobsouzaa ▴ 830
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1
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1.8k
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Comment: C: Loop R script with text modifying through different CNV files
4.8 years ago by brunobsouzaa ▴ 830
0
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1
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1.8k
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Comment: C: Loop R script with text modifying through different CNV files
4.8 years ago by brunobsouzaa ▴ 830
0
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1
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1.8k
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Comment: C: Loop R script with text modifying through different CNV files
4.8 years ago by brunobsouzaa ▴ 830
1
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11
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1.8k
views
Loop R script with text modifying through different CNV files
R CNV
updated 4.8 years ago by 11k • written 4.8 years ago by ▴ 830
212 results • Page 4 of 5
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