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5
votes
1
reply
28k
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Answer: C: MACS2 Broad peaks output BED format
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 210
0
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1
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5.5k
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Comment: C: align_and_estimate_abundance.pl ERROR/ QUESTION
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 210
0
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0
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9.9k
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Answer: A: heatmap for a predetermined order of rows
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 210
0
votes
1
reply
27k
views
Answer: A: Kmer Content in FastQC failed
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 210
0
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1
reply
3.5k
views
Comment: C: How to identify a certain pattern for histone marks
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 210
0
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0
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3.5k
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Comment: C: How to identify a certain pattern for histone marks
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 210
0
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1
reply
5.9k
views
Comment: C: Remove overlapping features from a gtf file?
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 210
0
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1
reply
3.4k
views
Comment: C: Building a pipeline
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 210
0
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1
reply
9.2k
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Comment: C: Bedtools Intersect Error
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 210
0
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1
reply
3.2k
views
Comment: C: Python Script Help for Cooccupancy
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 210
0
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1
reply
3.2k
views
Comment: C: Python Script Help for Cooccupancy
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 210
0
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1
reply
4.8k
views
Comment: C: P-value for enrichment of ChIP-Seq peaks within a genomic annotation
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 210
0
votes
0
replies
6.0k
views
Comment: C: How to find duplicate values in two columns and move them to a third?
updated 6.0 years ago by 45k • written 10.0 years ago by ▴ 210
0
votes
2
replies
6.0k
views
Comment: C: How to find duplicate values in two columns and move them to a third?
updated 6.0 years ago by 45k • written 10.1 years ago by ▴ 210
0
votes
1
reply
6.0k
views
Comment: C: How to find duplicate values in two columns and move them to a third?
updated 6.0 years ago by 45k • written 10.1 years ago by ▴ 210
0
votes
1
reply
13k
views
Comment: C: Converting .narrowPeak file to GRanges for use in Bioconductor ChIPseeker
updated 6.0 years ago by 45k • written 10.1 years ago by ▴ 210
0
votes
1
reply
13k
views
Comment: A: Converting .narrowPeak file to GRanges for use in Bioconductor ChIPseeker
updated 6.0 years ago by 45k • written 10.1 years ago by ▴ 210
0
votes
0
replies
13k
views
Comment: C: Converting .narrowPeak file to GRanges for use in Bioconductor ChIPseeker
updated 6.0 years ago by 45k • written 10.1 years ago by ▴ 210
0
votes
1
reply
13k
views
Comment: C: Converting .narrowPeak file to GRanges for use in Bioconductor ChIPseeker
updated 6.0 years ago by 45k • written 10.1 years ago by ▴ 210
0
votes
1
reply
13k
views
Comment: C: Converting .narrowPeak file to GRanges for use in Bioconductor ChIPseeker
updated 6.0 years ago by 45k • written 10.1 years ago by ▴ 210
7
votes
13
replies
13k
views
Converting .narrowPeak file to GRanges for use in Bioconductor ChIPseeker
R ChIP-Seq ChIPseeker
updated 8.3 years ago by ▴ 50 • written 10.1 years ago by ▴ 210
0
votes
0
replies
5.9k
views
Comment: C: a problem with peak annotation after ChIP-seq
9.1 years ago by dally ▴ 210
0
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1
reply
3.7k
views
Comment: C: How to get native bash in Windows 10
9.2 years ago by dally ▴ 210
0
votes
1
reply
9.3k
views
Comment: C: SRAtoolkit error during fastq-dump
9.7 years ago by dally ▴ 210
0
votes
0
replies
9.3k
views
Comment: C: SRAtoolkit error during fastq-dump
9.7 years ago by dally ▴ 210
6
votes
8
replies
9.3k
views
SRAtoolkit error during fastq-dump
sratoolkit fastq-dump software error ChIP-Seq
updated 3.3 years ago by 45k • written 9.7 years ago by ▴ 210
0
votes
1
reply
9.3k
views
Comment: C: SRAtoolkit error during fastq-dump
9.7 years ago by dally ▴ 210
0
votes
1
reply
4.4k
views
Comment: C: Discovering motifs for core promoter elements on a set of enhancer sites
9.7 years ago by dally ▴ 210
0
votes
1
reply
4.4k
views
Comment: C: Discovering motifs for core promoter elements on a set of enhancer sites
9.7 years ago by dally ▴ 210
0
votes
0
replies
4.4k
views
Comment: C: Discovering motifs for core promoter elements on a set of enhancer sites
9.7 years ago by dally ▴ 210
0
votes
1
reply
4.4k
views
Comment: Comment: Discovering motifs for core promoter elements on a set of enhancer sites
updated 3.3 years ago by 45k • written 9.7 years ago by ▴ 210
3
votes
11
replies
4.4k
views
Discovering motifs for core promoter elements on a set of enhancer sites
meme chip-seq motif-analysis
updated 3.3 years ago by 45k • written 9.7 years ago by ▴ 210
3
votes
0
replies
25k
views
Answer: Answer: Bed to BedGraph
updated 3.3 years ago by 45k • written 9.7 years ago by ▴ 210
4
votes
1
reply
2.6k
views
Should I merge my two datasets together or something else?
datasets enhancers
updated 2.6 years ago by 45k • written 9.8 years ago by ▴ 210
1
vote
2
replies
4.3k
views
Answer: A: MeDIP-seq and hMeDIP-seq analysis
9.8 years ago by dally ▴ 210
4
votes
1
reply
3.4k
views
Individual colors for heatmaps using ngsplot
ngsplot ChIP-Seq
updated 3.3 years ago by 45k • written 9.8 years ago by ▴ 210
0
votes
1
reply
5.2k
views
Comment: C: bedtools coverageBed: not sorted output
9.8 years ago by dally ▴ 210
0
votes
1
reply
5.2k
views
Comment: C: bedtools coverageBed: not sorted output
9.8 years ago by dally ▴ 210
0
votes
1
reply
5.2k
views
Comment: C: bedtools coverageBed: not sorted output
9.8 years ago by dally ▴ 210
0
votes
0
replies
3.1k
views
Comment: C: How to determine quantitative differences of histone enrichment in enhancer regi
9.8 years ago by dally ▴ 210
2
votes
5
replies
3.1k
views
How to determine quantitative differences of histone enrichment in enhancer regions
R enhancers ChIP-Seq
updated 3.3 years ago by 45k • written 9.8 years ago by ▴ 210
0
votes
1
reply
3.1k
views
Comment: C: How to determine quantitative differences of histone enrichment in enhancer regi
9.8 years ago by dally ▴ 210
0
votes
0
replies
5.5k
views
Comment: C: align_and_estimate_abundance.pl ERROR/ QUESTION
9.8 years ago by dally ▴ 210
0
votes
1
reply
5.5k
views
Answer: A: align_and_estimate_abundance.pl ERROR/ QUESTION
9.8 years ago by dally ▴ 210
0
votes
0
replies
1.9k
views
Comment: C: R 3.2.3 is out
9.8 years ago by dally ▴ 210
0
votes
0
replies
1.4k
views
groHMM input data
R groHMM
9.8 years ago by dally ▴ 210
6
votes
8
replies
3.5k
views
How to identify a certain pattern for histone marks
IGV bedops ChIP-Seq bedtools
updated 3.2 years ago by 45k • written 9.9 years ago by ▴ 210
5
votes
1
reply
6.3k
views
Generating Gencode TSS file
gencode tss
updated 3.2 years ago by 45k • written 9.9 years ago by ▴ 210
1
vote
3
replies
3.9k
views
Predicting Enhancer Sites
enhancers bedtools
updated 3.2 years ago by 45k • written 10.0 years ago by ▴ 210
0
votes
1
reply
3.9k
views
Comment: C: Predicting Enhancer Sites
10.0 years ago by dally ▴ 210
77 results • Page 1 of 2
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