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Answer: Answer: How to compute physical per-base coverage from WGS paired-end reads?
updated 2.0 years ago by 43k • written 9.2 years ago by ★ 2.0k
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1
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4.4k
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Comment: Comment: Application of Hi-C
updated 2.0 years ago by 43k • written 9.2 years ago by ★ 2.0k
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0
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7.6k
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Comment: Comment: How to compute physical per-base coverage from WGS paired-end reads?
updated 2.0 years ago by 43k • written 9.2 years ago by ★ 2.0k
1
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1
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1.8k
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Answer: Answer: What are the steps to follow to extract a promoter region starting from illumina
updated 2.0 years ago by 43k • written 9.2 years ago by ★ 2.0k
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1
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4.4k
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Comment: Comment: Application of Hi-C
updated 2.0 years ago by 43k • written 9.2 years ago by ★ 2.0k
2
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1
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4.4k
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Answer: Answer: Application of Hi-C
updated 2.0 years ago by 43k • written 9.2 years ago by ★ 2.0k
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0
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3.9k
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Comment: C: Scan a large genome for the ocurrence of a single sequence motif?
9.2 years ago by Fidel ★ 2.0k
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0
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10k
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Comment: C: Normalising ChIP-seq data to RPM using a 1 or 2 count for paired-end data?
9.2 years ago by Fidel ★ 2.0k
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0
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10k
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Comment: Comment: Normalising ChIP-seq data to RPM using a 1 or 2 count for paired-end data?
updated 2.1 years ago by 43k • written 9.2 years ago by ★ 2.0k
0
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1
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10k
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Comment: C: Normalising ChIP-seq data to RPM using a 1 or 2 count for paired-end data?
9.2 years ago by Fidel ★ 2.0k
0
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1
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10k
views
Comment: Comment: Normalising ChIP-seq data to RPM using a 1 or 2 count for paired-end data?
updated 2.1 years ago by 43k • written 9.2 years ago by ★ 2.0k
8
votes
1
reply
10k
views
Answer: Answer: Normalising ChIP-seq data to RPM using a 1 or 2 count for paired-end data?
updated 2.1 years ago by 43k • written 9.2 years ago by ★ 2.0k
0
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1
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3.9k
views
Comment: Comment: Scan a large genome for the ocurrence of a single sequence motif?
updated 2.1 years ago by 43k • written 9.3 years ago by ★ 2.0k
0
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1
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3.9k
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Comment: Comment: Scan a large genome for the ocurrence of a single sequence motif?
updated 2.1 years ago by 43k • written 9.3 years ago by ★ 2.0k
1
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1
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3.2k
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Comment: Comment: Metaseq: Average ChIP-seq signal over promoters error
updated 2.1 years ago by 43k • written 9.3 years ago by ★ 2.0k
0
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1
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1.9k
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Comment: Comment: Analysis for Unknwon motifs obtained from Meme or Dream.
updated 2.1 years ago by 43k • written 9.3 years ago by ★ 2.0k
1
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2
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3.9k
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Comment: Comment: Scan a large genome for the ocurrence of a single sequence motif?
updated 2.1 years ago by 43k • written 9.3 years ago by ★ 2.0k
1
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1
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3.9k
views
Answer: Answer: Scan a large genome for the ocurrence of a single sequence motif?
updated 2.1 years ago by 43k • written 9.3 years ago by ★ 2.0k
0
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1
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9.7k
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Answer: Answer: How do I view the height / distribution of ChIP-seq peaks?
updated 2.1 years ago by 43k • written 9.3 years ago by ★ 2.0k
4
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1
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16k
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Answer: A: Best Way To Get Truly Unique Reads In Bowtie/Sam?
updated 10.0 years ago by 11k • written 11.5 years ago by ★ 2.0k
2
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0
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3.4k
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Answer: A: Count The Coverage Rate Of A Bacterial Genome'S Bam File
10.1 years ago by Fidel ★ 2.0k
7
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0
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12k
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Answer: A: How To Plot Read Coverage Over Many Different Genomic Regions?
10.1 years ago by Fidel ★ 2.0k
1
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0
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11k
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Answer: A: Emule "Samtools View" Using Pysam
10.3 years ago by Fidel ★ 2.0k
5
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1
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13k
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Answer: A: Chipseq Wig File With The Input Subtracted From Chip Sample
10.4 years ago by Fidel ★ 2.0k
5
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8
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12k
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How To Read A Bigwig File Using Python
python bigwig
updated 10.6 years ago by ▴ 100 • written 12.1 years ago by ★ 2.0k
1
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0
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3.4k
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Answer: A: 'Potential Rna-Dna Binding Site In Alu Repeat', Or 'Why Should I Allow Multiple
10.8 years ago by Fidel ★ 2.0k
11
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0
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40k
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Answer: A: Is It Possible To Get Fragment Length, Read Length And Number Of Fragments From
10.9 years ago by Fidel ★ 2.0k
17
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3
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15k
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Is There Any Advantage Of Paired End Sequencing For Chip-Seq?
paired-end chip-seq
updated 11.1 years ago by 6.0k • written 11.1 years ago by ★ 2.0k
0
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0
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4.1k
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Answer: A: Identification Of Protein Complexes In A List Of Proteins
11.1 years ago by Fidel ★ 2.0k
0
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0
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12k
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Comment: C: How To Plot Read Coverage Over Many Different Genomic Regions?
11.2 years ago by Fidel ★ 2.0k
0
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1
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12k
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Answer: A: How To Plot Read Coverage Over Many Different Genomic Regions?
11.3 years ago by Fidel ★ 2.0k
2
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1
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2.0k
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Answer: A: Dna-Seq Multiple Mapped Tags
updated 11.4 years ago by 100k • written 11.4 years ago by ★ 2.0k
0
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1
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16k
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Comment: C: Best Way To Get Truly Unique Reads In Bowtie/Sam?
11.5 years ago by Fidel ★ 2.0k
5
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0
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3.0k
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Answer: A: Visualization Of Read Count On Genome
11.5 years ago by Fidel ★ 2.0k
0
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0
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19k
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Comment: C: Bioinformatics Training On Next-Generation Sequencing Data
11.5 years ago by Fidel ★ 2.0k
2
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0
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4.8k
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Answer: A: Differential Open Chromatin Locations From Dnase-Seq Data
11.5 years ago by Fidel ★ 2.0k
0
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0
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2.6k
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Answer: A: Create Image From Mapping Region
11.6 years ago by Fidel ★ 2.0k
0
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0
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3.5k
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Comment: C: Bowtie Inaccuracy Limit
11.8 years ago by Fidel ★ 2.0k
0
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1
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6.3k
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Comment: C: Peak Calling Biasing!!! [Macs14]
11.9 years ago by Fidel ★ 2.0k
0
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1
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3.1k
views
Comment: C: Is The Example In The Sam Format Specification Documentation Incorrect?
11.9 years ago by Fidel ★ 2.0k
0
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0
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3.0k
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Answer: A: Convert Un-Indexed Sam File To Wig File
12.0 years ago by Fidel ★ 2.0k
1
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1
reply
7.3k
views
Answer: A: Building A Webpage For Accessing Rna-Seq Expression Data
12.1 years ago by Fidel ★ 2.0k
5
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2
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9.2k
views
Answer: A: Why Does Macs Use A Genome Size Of 2.7 Billion Instead Of 3 Billion For Human?
12.1 years ago by Fidel ★ 2.0k
0
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0
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9.2k
views
Comment: C: Why Does Macs Use A Genome Size Of 2.7 Billion Instead Of 3 Billion For Human?
12.1 years ago by Fidel ★ 2.0k
0
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0
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12k
views
Comment: C: How To Read A Bigwig File Using Python
12.1 years ago by Fidel ★ 2.0k
1
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0
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12k
views
Comment: C: How To Read A Bigwig File Using Python
12.1 years ago by Fidel ★ 2.0k
0
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0
replies
3.1k
views
Comment: C: Pharmgkb: Obtain A List Of Vip Genes And List All Linked Drugs To Them
12.1 years ago by Fidel ★ 2.0k
0
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0
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3.1k
views
Comment: C: Pharmgkb: Obtain A List Of Vip Genes And List All Linked Drugs To Them
12.1 years ago by Fidel ★ 2.0k
7
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0
replies
7.1k
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Answer: A: Calculating The Depth/Level Of Shared Gene Ontology (Go) Terms Between Protein P
12.1 years ago by Fidel ★ 2.0k
0
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0
replies
4.2k
views
Comment: C: Gc Content In Mate Pairs / Pair-End
12.2 years ago by Fidel ★ 2.0k
159 results • Page 3 of 4
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