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50
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20
replies
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Forum: Explain bioinformatics to a 10 year old
bioinformatics
updated 2.5 years ago by 45k • written 9.5 years ago by ★ 1.1k
21
votes
8
replies
3.6k
views
Approaches for SV calling from De Novo assembly
SV Assembly
updated 3.2 years ago by 45k • written 9.6 years ago by ★ 1.1k
0
votes
0
replies
3.1k
views
Comment: C: Software for finding breakpoints along the genome
updated 5.7 years ago by 45k • written 9.7 years ago by ★ 1.1k
0
votes
2
replies
3.1k
views
Comment: C: Software for finding breakpoints along the genome
updated 5.7 years ago by 45k • written 9.7 years ago by ★ 1.1k
0
votes
0
replies
3.9k
views
Answer: Answer: How to filter a fasta file?
updated 2.5 years ago by 45k • written 9.7 years ago by ★ 1.1k
0
votes
0
replies
20k
views
Answer: A: How to split fasta into seperate files by chromosome (in the header)
updated 5.7 years ago by 45k • written 9.7 years ago by ★ 1.1k
0
votes
2
replies
2.3k
views
Is there an allternative to Affymetrix GTC for Genotyping?
genotyping microarray affymetrix
updated 5.7 years ago by ▴ 630 • written 9.2 years ago by ★ 1.1k
0
votes
1
reply
7.2k
views
Comment: C: how to resolve , configure: error: Stopping here as BOOST thread lib must be ava
updated 5.8 years ago by 45k • written 9.7 years ago by ★ 1.1k
0
votes
2
replies
5.6k
views
Comment: C: Blastn without nt database
updated 5.8 years ago by 45k • written 9.7 years ago by ★ 1.1k
0
votes
1
reply
5.6k
views
Comment: C: Blastn without nt database
updated 5.8 years ago by 45k • written 9.7 years ago by ★ 1.1k
0
votes
1
reply
12k
views
Comment: C: BEDtools coverage output
updated 5.8 years ago by 45k • written 9.7 years ago by ★ 1.1k
0
votes
2
replies
12k
views
Comment: C: BEDtools coverage output
updated 5.8 years ago by 45k • written 9.7 years ago by ★ 1.1k
0
votes
1
reply
3.1k
views
Comment: C: Using the same reads to assemble mitochondria and chloroplast genomes
updated 5.8 years ago by 45k • written 9.7 years ago by ★ 1.1k
0
votes
0
replies
5.7k
views
Comment: C: Velvet: What's the relation between kmer coverage and normal coverage?
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 1.1k
0
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0
replies
4.1k
views
Comment: C: Need Help With SyMap Building And MySQL
updated 5.8 years ago by 45k • written 9.9 years ago by ★ 1.1k
0
votes
0
replies
1.5k
views
Comment: C: Any published data with known percentage of virus sequences?
7.0 years ago by novice ★ 1.1k
0
votes
3
replies
1.5k
views
Any published data with known percentage of virus sequences?
next-gen metagenomics
7.0 years ago by novice ★ 1.1k
7
votes
1
reply
8.6k
views
Answer: A: Assembly vs scaffolding
updated 7.0 years ago by 45k • written 9.6 years ago by ★ 1.1k
7
votes
0
replies
8.4k
views
Answer: A: How to repair *all* problems identified by FastQC?
7.8 years ago by novice ★ 1.1k
1
vote
0
replies
2.9k
views
Comment: C: Processing FASTA files
8.2 years ago by novice ★ 1.1k
1
vote
1
reply
3.3k
views
Structural Variation Discovery: Delly's Output
sv delly mapq
updated 8.2 years ago by ★ 2.0k • written 8.6 years ago by ★ 1.1k
1
vote
0
replies
8.3k
views
Answer: A: Editing header of a fasta file
8.2 years ago by novice ★ 1.1k
0
votes
0
replies
3.2k
views
Comment: C: Increase the fifth column ( MAPQ) value in Sam file
8.3 years ago by novice ★ 1.1k
1
vote
2
replies
3.2k
views
Comment: C: Increase the fifth column ( MAPQ) value in Sam file
8.3 years ago by novice ★ 1.1k
1
vote
1
reply
3.2k
views
Answer: A: Increase the fifth column ( MAPQ) value in Sam file
8.3 years ago by novice ★ 1.1k
1
vote
1
reply
4.2k
views
Answer: A: Extracting Features That Appear In TSS Regions
8.3 years ago by novice ★ 1.1k
0
votes
1
reply
7.1k
views
Comment: C: samtools view region
8.3 years ago by novice ★ 1.1k
0
votes
0
replies
2.8k
views
Answer: A: Reliable alignment tool for similar sequences of similar length other than Mumme
8.3 years ago by novice ★ 1.1k
0
votes
0
replies
2.3k
views
How does MITObim (or MIRA's mapping mode) call bases in the consensus?
MITObim MIRA mapping
updated 3.2 years ago by 45k • written 9.6 years ago by ★ 1.1k
0
votes
1
reply
2.9k
views
Comment: C: R loop not functional
8.3 years ago by novice ★ 1.1k
0
votes
0
replies
3.2k
views
Comment: C: How to preform genome annotation?
8.3 years ago by novice ★ 1.1k
0
votes
0
replies
2.4k
views
Comment: C: Loop bedtools command over multiple files
8.3 years ago by novice ★ 1.1k
1
vote
1
reply
3.2k
views
Comment: C: How to preform genome annotation?
8.3 years ago by novice ★ 1.1k
0
votes
2
replies
3.5k
views
Comment: C: Adding .txt or .fa extension to UnixExecutable
8.3 years ago by novice ★ 1.1k
3
votes
2
replies
5.3k
views
Answer: A: Alignment time of TopHat (v.2.1.1) increases while increasing threads (using mul
8.3 years ago by novice ★ 1.1k
0
votes
1
reply
3.5k
views
Comment: C: Adding .txt or .fa extension to UnixExecutable
8.3 years ago by novice ★ 1.1k
0
votes
1
reply
1.6k
views
Comment: C: Extending the BAM index to include mate info
8.3 years ago by novice ★ 1.1k
0
votes
3
replies
1.6k
views
Extending the BAM index to include mate info
samtools index
8.3 years ago by novice ★ 1.1k
8
votes
2
replies
2.3k
views
Forum: Factors to consider when applying to computational biology PhD positions
graduate-school academia
updated 2.4 years ago by 45k • written 8.3 years ago by ★ 1.1k
0
votes
0
replies
3.4k
views
Comment: C: What tools do you suggest for resolving large insertions?
8.3 years ago by novice ★ 1.1k
0
votes
0
replies
3.4k
views
Comment: C: What tools do you suggest for resolving large insertions?
8.3 years ago by novice ★ 1.1k
0
votes
2
replies
3.4k
views
Comment: C: What tools do you suggest for resolving large insertions?
8.3 years ago by novice ★ 1.1k
2
votes
7
replies
3.4k
views
What tools do you suggest for resolving large insertions?
WGS SV
updated 8.3 years ago by ★ 3.0k • written 8.3 years ago by ★ 1.1k
2
votes
6
replies
8.8k
views
What does it mean to say "b-allele frequency"?
snp canvas
updated 8.7 years ago by • 0 • written 9.0 years ago by ★ 1.1k
0
votes
5
replies
2.5k
views
Faster extraction of reads mapped to a region
samtools alignment
8.8 years ago by novice ★ 1.1k
0
votes
0
replies
2.5k
views
Comment: C: Faster extraction of reads mapped to a region
8.8 years ago by novice ★ 1.1k
0
votes
0
replies
2.5k
views
Comment: C: Faster extraction of reads mapped to a region
8.8 years ago by novice ★ 1.1k
0
votes
1
reply
25k
views
Comment: C: Calculating Variant Allele Frequency
8.8 years ago by novice ★ 1.1k
0
votes
1
reply
25k
views
Comment: C: Calculating Variant Allele Frequency
8.8 years ago by novice ★ 1.1k
13
votes
7
replies
25k
views
Calculating Variant Allele Frequency
vaf
8.8 years ago by novice ★ 1.1k
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