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questions
0
votes
0
replies
453
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GnomAD subset vcf files
exac
gnomad
population
vcf
subset
22 months ago by
kanika.151
▴ 130
0
votes
6
replies
1.2k
views
Alignment in WES
trimmomatic
alignment
WES
exome
sequencing
updated 3.3 years ago by
Biostar
20 • written 3.4 years ago by
kanika.151
▴ 130
2
votes
6
replies
3.4k
views
1 base pair to 'x' byte conversion
fastq file
cluster
conversion
base pairs
byte
4.3 years ago by
kanika.151
▴ 130
2
votes
7
replies
1.7k
views
Annotating dbnsfp by SnpSift on a cluster
next-gen
dna-seq
annotation
dbnsfp
snpsift
4.5 years ago by
kanika.151
▴ 130
0
votes
3
replies
2.1k
views
TopHat alignment on Trinity Transcripts giving a lot of unmapped results.
Unmapped
tophat
Trinity
updated 21 months ago by
Ram
43k • written 8.2 years ago by
kanika.151
▴ 130
3
votes
10
replies
3.3k
views
Trinity predicting more number of genes?
RNA-Seq
genes
trinity
updated 21 months ago by
Ram
43k • written 8.3 years ago by
kanika.151
▴ 130
5
votes
3
replies
3.2k
views
Which one is better and Why? edgeR DESeq2
RNA-Seq
cuffdiff
edgeR
DESEq2
updated 20 months ago by
Ram
43k • written 8.4 years ago by
kanika.151
▴ 130
0
votes
5
replies
2.8k
views
What is the criteria of logCPM? rpkm() error
RNA-Seq
edgeR
updated 21 months ago by
Ram
43k • written 8.4 years ago by
kanika.151
▴ 130
7
votes
11
replies
6.1k
views
RNA-Seq Analysis: To sort or not to Sort?
htseq
sam
rna-seq
updated 21 months ago by
Ram
43k • written 8.4 years ago by
kanika.151
▴ 130
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