Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
261
views
Comment: Comment: Identification of variants from Spatial Transcriptomics using STARSolo
5 weeks ago by kanika.151 ▴ 160
1
vote
3
replies
261
views
Identification of variants from Spatial Transcriptomics using STARSolo
spatial-transcriptomics STAR visium
updated 5 weeks ago by 44k • written 5 weeks ago by ▴ 160
1
vote
3
replies
316
views
lncRNA and mRNA analysis on Total RNA Sequencing data
mRNA RNASeq lncRNA
updated 8 weeks ago by 102k • written 8 weeks ago by ▴ 160
0
votes
0
replies
345
views
Answer: Answer: Getting gnomAD allele frequencies for checking against populations
8 weeks ago by kanika.151 ▴ 160
0
votes
0
replies
316
views
Comment: Comment: lncRNA and mRNA analysis on Total RNA Sequencing data
8 weeks ago by kanika.151 ▴ 160
0
votes
1
reply
1.5k
views
Comment: Comment: What is the difference between `possorted_genome_bam.bam` in the output of `cell
9 weeks ago by kanika.151 ▴ 160
1
vote
0
replies
1.5k
views
Comment: Comment: What is the difference between `possorted_genome_bam.bam` in the output of `cell
9 weeks ago by kanika.151 ▴ 160
1
vote
0
replies
610
views
Comment: Comment: Research Scientist - Bioinformatics position in Milan, Italy
10 weeks ago by kanika.151 ▴ 160
2
votes
2
replies
610
views
Job: Research Scientist - Bioinformatics position in Milan, Italy
R Python RNASeq singleCell
10 weeks ago by kanika.151 ▴ 160
0
votes
1
reply
676
views
Answer: Answer: UMI RNASeq data analysis
2.6 years ago by kanika.151 ▴ 160
1
vote
0
replies
1.8k
views
Comment: Comment: Low mapping rate due to rRNA
2.6 years ago by kanika.151 ▴ 160
0
votes
1
reply
1.1k
views
Comment: Comment: About Whole Exome Sequencing analysis
2.6 years ago by kanika.151 ▴ 160
0
votes
0
replies
704
views
Answer: Answer: How to find Polygenic Risk Scores?
2.6 years ago by kanika.151 ▴ 160
0
votes
0
replies
1.1k
views
Answer: Answer: Extract R1 and R2 from sam file generated by bowtie2
2.6 years ago by kanika.151 ▴ 160
0
votes
0
replies
588
views
GnomAD subset vcf files
exac gnomad population vcf subset
2.6 years ago by kanika.151 ▴ 160
0
votes
0
replies
3.1k
views
Answer: Answer: Some questions about call variants for mtDNA using GATK HaplotypeCaller
2.7 years ago by kanika.151 ▴ 160
0
votes
0
replies
4.5k
views
Answer: Answer: Read Counts from miRDeep2 for posterior DE analysis
3.2 years ago by kanika.151 ▴ 160
0
votes
0
replies
3.9k
views
Answer: Answer: How to generate the contigs ploidy priors table (yeast) for GATK DetermineGermli
3.2 years ago by kanika.151 ▴ 160
0
votes
0
replies
12k
views
Comment: Comment: Relatedness vs relatedness2 from vcftools give different results
3.3 years ago by kanika.151 ▴ 160
0
votes
0
replies
3.1k
views
Comment: Comment: Using wildcards in function in rules
3.6 years ago by kanika.151 ▴ 160
0
votes
1
reply
3.1k
views
Comment: Comment: Using wildcards in function in rules
3.6 years ago by kanika.151 ▴ 160
0
votes
1
reply
3.1k
views
Comment: Comment: Using wildcards in function in rules
3.6 years ago by kanika.151 ▴ 160
0
votes
1
reply
3.1k
views
Comment: Comment: Using wildcards in function in rules
3.6 years ago by kanika.151 ▴ 160
0
votes
1
reply
3.1k
views
Answer: Answer: Using wildcards in function in rules
3.6 years ago by kanika.151 ▴ 160
1
vote
2
replies
1.1k
views
Answer: Answer: Snakemake error
3.6 years ago by kanika.151 ▴ 160
0
votes
0
replies
6.4k
views
Answer: Answer: Difficulty filtering VCF file with vcftools
3.6 years ago by kanika.151 ▴ 160
0
votes
0
replies
4.8k
views
Comment: Comment: GATK DepthOfCoverage: 'total coverage' and 'mean coverage' meaning
3.7 years ago by kanika.151 ▴ 160
0
votes
0
replies
4.8k
views
Comment: Comment: GATK DepthOfCoverage: 'total coverage' and 'mean coverage' meaning
3.7 years ago by kanika.151 ▴ 160
0
votes
0
replies
2.6k
views
Comment: Comment: gene annotation with dbNSFP_gene
3.8 years ago by kanika.151 ▴ 160
1
vote
0
replies
3.1k
views
Answer: A: Suggest vcf filtered parameter for gatk VariantFiltration
3.8 years ago by kanika.151 ▴ 160
0
votes
0
replies
3.6k
views
Comment: C: counting after aligning miRNA reads to miRBase mature miRNA instead of reference
3.9 years ago by kanika.151 ▴ 160
0
votes
0
replies
2.3k
views
Comment: C: counts reads for miRNA mapped againt mirbase
3.9 years ago by kanika.151 ▴ 160
0
votes
1
reply
3.6k
views
Answer: A: counting after aligning miRNA reads to miRBase mature miRNA instead of reference
3.9 years ago by kanika.151 ▴ 160
1
vote
1
reply
1.6k
views
Comment: C: Non-coding region of WGS
4.0 years ago by kanika.151 ▴ 160
1
vote
1
reply
1.6k
views
Comment: C: Non-coding region of WGS
4.0 years ago by kanika.151 ▴ 160
0
votes
0
replies
1.9k
views
Answer: Answer: Which VCF's to use for BQSR in GATK
updated 22 months ago by 44k • written 4.0 years ago by ▴ 160
2
votes
6
replies
1.5k
views
Alignment in WES
trimmomatic alignment WES exome sequencing
updated 4.1 years ago by 20 • written 4.2 years ago by ▴ 160
0
votes
1
reply
1.5k
views
Comment: C: Alignment in WES
4.2 years ago by kanika.151 ▴ 160
0
votes
1
reply
1.5k
views
Comment: C: Alignment in WES
4.2 years ago by kanika.151 ▴ 160
0
votes
1
reply
2.8k
views
Answer: A: featureCounts with pseudobam
4.8 years ago by kanika.151 ▴ 160
0
votes
0
replies
5.4k
views
Comment: C: Error ecountered while running conifer with demo data set
4.9 years ago by kanika.151 ▴ 160
0
votes
0
replies
5.4k
views
Comment: C: Error ecountered while running conifer with demo data set
4.9 years ago by kanika.151 ▴ 160
0
votes
0
replies
5.4k
views
Comment: C: Error ecountered while running conifer with demo data set
4.9 years ago by kanika.151 ▴ 160
0
votes
0
replies
2.3k
views
Answer: A: tables.exceptions.NoSuchNodeError: group ``/`` does not have a child named ``sam
4.9 years ago by kanika.151 ▴ 160
0
votes
0
replies
5.4k
views
Comment: C: Error ecountered while running conifer with demo data set
5.0 years ago by kanika.151 ▴ 160
0
votes
0
replies
4.2k
views
Comment: C: 1 base pair to 'x' byte conversion
5.0 years ago by kanika.151 ▴ 160
2
votes
6
replies
4.2k
views
1 base pair to 'x' byte conversion
fastq file cluster conversion base pairs byte
5.0 years ago by kanika.151 ▴ 160
0
votes
1
reply
4.2k
views
Comment: A: 1 base pair to 'x' byte conversion
5.0 years ago by kanika.151 ▴ 160
0
votes
0
replies
756
views
Answer: A: GATK Indelrealignment Problem : The input is truncated?
5.0 years ago by kanika.151 ▴ 160
1
vote
0
replies
19k
views
Answer: A: Extract Dendrogram Information From Heatmap Generated By Heatmap.2
updated 5.1 years ago by 44k • written 9.0 years ago by ▴ 160
105 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6