Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
2.8k
views
Comment: Comment: Align Illumina short reads to a subset of human reference genome
3.2 years ago by Thomas ▴ 180
2
votes
1
reply
2.8k
views
Answer: Answer: Align Illumina short reads to a subset of human reference genome
3.2 years ago by Thomas ▴ 180
0
votes
0
replies
8.2k
views
Comment: Comment: Looking for a tool which provides mapping quality score distributions from BAM f
3.2 years ago by Thomas ▴ 180
0
votes
1
reply
8.2k
views
Comment: Comment: Looking for a tool which provides mapping quality score distributions from BAM f
3.2 years ago by Thomas ▴ 180
21
votes
10
replies
8.2k
views
Looking for a tool which provides mapping quality score distributions from BAM files
picard samtools multiqc
3.2 years ago by Thomas ▴ 180
0
votes
0
replies
8.2k
views
Comment: Comment: Looking for a tool which provides mapping quality score distributions from BAM f
4.2 years ago by Thomas ▴ 180
0
votes
0
replies
8.2k
views
Comment: Comment: Looking for a tool which provides mapping quality score distributions from BAM f
4.2 years ago by Thomas ▴ 180
5
votes
1
reply
1.6k
views
What does samtools mean by 'orientation' when marking duplicates?
read_orientation samtools htslib
updated 4.2 years ago by ▴ 390 • written 4.2 years ago by ▴ 180
0
votes
0
replies
8.2k
views
Comment: Comment: Looking for a tool which provides mapping quality score distributions from BAM f
4.2 years ago by Thomas ▴ 180
1
vote
0
replies
12k
views
Answer: A: which is better for rna-seq analysis? R or python?
5.4 years ago by Thomas ▴ 180
0
votes
0
replies
3.2k
views
Comment: C: Problem starting and running Gmaj (MAF file viewer and manipulator)
5.5 years ago by Thomas ▴ 180
9
votes
3
replies
2.0k
views
Salmon: Any downstream DEA tools which uses abundance estimate variation information?
salmon deseq2
updated 5.5 years ago by 90k • written 6.8 years ago by ▴ 180
0
votes
1
reply
4.9k
views
Comment: C: Ensembl BioMart - How to get Transcript IDs version increment?
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 180
0
votes
0
replies
4.9k
views
Comment: C: Ensembl BioMart - How to get Transcript IDs version increment?
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 180
0
votes
0
replies
10k
views
Comment: C: Is There An Easy Way To Read The Maf Files On The Ucsc Website?
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 180
1
vote
4
replies
3.2k
views
Problem starting and running Gmaj (MAF file viewer and manipulator)
Gmaj JRE Java MAF UCSC
updated 7.1 years ago by 45k • written 9.7 years ago by ▴ 180
0
votes
1
reply
3.0k
views
Comment: C: Transcripts associated with microRNAs
updated 7.2 years ago by 45k • written 9.7 years ago by ▴ 180
0
votes
1
reply
3.0k
views
Comment: C: Transcripts associated with microRNAs
updated 7.2 years ago by 45k • written 9.7 years ago by ▴ 180
0
votes
1
reply
3.0k
views
Answer: A: Transcripts associated with microRNAs
updated 7.2 years ago by 45k • written 9.7 years ago by ▴ 180
5
votes
5
replies
7.3k
views
Cufflinks gffread utility
cufflinks gffread gff reverse complement
updated 7.2 years ago by • 0 • written 9.5 years ago by ▴ 180
5
votes
4
replies
3.6k
views
Running Galaxy tools locally using bx-python
bx-python Galaxy MAF Stitch-MAF-blocks
updated 3.3 years ago by 45k • written 9.8 years ago by ▴ 180
0
votes
0
replies
1.4k
views
Annotate pairwise alignment with query sequence quality scores
alignment quality scores
7.5 years ago by Thomas ▴ 180
0
votes
1
reply
12k
views
Comment: C: kallisto: strand-specific and fragment length calculation
7.8 years ago by Thomas ▴ 180
1
vote
0
replies
1.9k
views
Answer: A: Trouble running vcf2phyloviz.py
7.9 years ago by Thomas ▴ 180
1
vote
1
reply
1.9k
views
Trouble running vcf2phyloviz.py
vcf2phyloviz vcf PyVCF
7.9 years ago by Thomas ▴ 180
1
vote
0
replies
11k
views
Comment: C: Getting average fragment length for single end reads
8.1 years ago by Thomas ▴ 180
0
votes
0
replies
2.0k
views
freebayes VCF output (FREQ header)
freebayes VCF
8.1 years ago by Thomas ▴ 180
2
votes
5
replies
3.6k
views
Potential bug in mafsInRegion?
mafsInRegion UCSC UCSC_genome_browser
updated 8.5 years ago by ▴ 20 • written 8.9 years ago by ▴ 180
0
votes
0
replies
1.8k
views
Comment: C: Problem using MIRZA (miRNA target prediction tool)
8.7 years ago by Thomas ▴ 180
0
votes
1
reply
1.8k
views
Problem using MIRZA (miRNA target prediction tool)
mirza miRNA target prediction miRNA expression
8.7 years ago by Thomas ▴ 180
0
votes
0
replies
2.0k
views
Problems installing CONTRAfold
contrafold compiling MIRZA installation
8.7 years ago by Thomas ▴ 180
0
votes
0
replies
3.6k
views
Comment: C: Potential bug in mafsInRegion?
8.8 years ago by Thomas ▴ 180
0
votes
0
replies
5.0k
views
Comment: C: Cannot load package "hgu133a.db"
8.8 years ago by Thomas ▴ 180
2
votes
1
reply
5.5k
views
Answer: A: Why don't phylogenetic analyses using DNA sequences and protein sequences result
8.9 years ago by Thomas ▴ 180
0
votes
1
reply
3.9k
views
Comment: C: Best way to define the Background Genes to compare overlapping DE genes from mic
8.9 years ago by Thomas ▴ 180
0
votes
1
reply
2.7k
views
Answer: A: Pathway analysis for miRNAs
9.1 years ago by Thomas ▴ 180
0
votes
0
replies
3.6k
views
Comment: C: Tair Seems To Show Incorrect Annotation For A Spliced Gene
9.5 years ago by Thomas ▴ 180
1
vote
0
replies
2.2k
views
Calculate mirSVR scores for custom sequences?
miRNA miRanda mirSVR Target Prediction
9.5 years ago by Thomas ▴ 180
0
votes
1
reply
3.8k
views
Comment: C: miRNA binding position in 5' UTR, CDS, and 3' UTR
9.7 years ago by Thomas ▴ 180
0
votes
1
reply
3.4k
views
Comment: C: Biotech Graduate aiming for bioinformatics MS leading to PhD
9.7 years ago by Thomas ▴ 180
2
votes
0
replies
4.8k
views
Answer: Answer: Is there some databases can predict the function of miRNA
updated 3.3 years ago by 45k • written 9.7 years ago by ▴ 180
1
vote
0
replies
2.7k
views
Answer: A: Bioinformatics / Computational Biology PhD
9.7 years ago by Thomas ▴ 180
0
votes
0
replies
2.3k
views
Comment: C: Why Biostars can be popular and succeed so quick
9.7 years ago by Thomas ▴ 180
8
votes
5
replies
4.9k
views
Ensembl BioMart - How to get Transcript IDs version increment?
Ensembl transcript-IDs Biomart version
updated 3.3 years ago by 45k • written 9.8 years ago by ▴ 180
0
votes
0
replies
3.6k
views
Comment: C: Running Galaxy tools locally using bx-python
9.8 years ago by Thomas ▴ 180
0
votes
0
replies
3.6k
views
Comment: C: Running Galaxy tools locally using bx-python
9.8 years ago by Thomas ▴ 180
0
votes
0
replies
4.5k
views
Comment: Comment: how to use galaxy tool interval_maf_to_merged_fasta.py which is the command-line
updated 3.8 years ago by 45k • written 9.8 years ago by ▴ 180
0
votes
1
reply
3.7k
views
Comment: C: Bug in bx-python maf?
9.8 years ago by Thomas ▴ 180
48 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6