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2
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1
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1.8k
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Answer: Answer: Use an annotated transcript in STAR but no .gtf file available
2.8 years ago by Dave Carlson ★ 2.2k
2
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1
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2.3k
views
Comment: Comment: How can I check if an RNA-Seq data is stranded (strand-specific) or not?
2.9 years ago by Dave Carlson ★ 2.2k
1
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0
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965
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Answer: Answer: Structure: not found
2.9 years ago by Dave Carlson ★ 2.2k
1
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0
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1.8k
views
Comment: Comment: runing R script on VCF dile in ubuntu
2.9 years ago by Dave Carlson ★ 2.2k
1
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1
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3.1k
views
Answer: Answer: AlphaFold 2 alternatives
3.0 years ago by Dave Carlson ★ 2.2k
2
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0
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2.4k
views
Comment: Comment: fastqc - typical for Illumina seq?
3.0 years ago by Dave Carlson ★ 2.2k
2
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0
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849
views
Answer: Answer: Quickly examining many MSAs
3.0 years ago by Dave Carlson ★ 2.2k
0
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1
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2.9k
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Answer: Answer: How to extract the GT from a given sample in a multisample VCF with cyvcf2?
3.0 years ago by Dave Carlson ★ 2.2k
0
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0
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2.0k
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Comment: Comment: Multiple-way Reciprocal Best BLAST Hits
3.0 years ago by Dave Carlson ★ 2.2k
0
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1
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1.8k
views
Comment: Comment: Does missing data(?) have a significant impact on phylogenetic studies?
3.0 years ago by Dave Carlson ★ 2.2k
0
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1
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1.8k
views
Comment: Comment: Does missing data(?) have a significant impact on phylogenetic studies?
3.0 years ago by Dave Carlson ★ 2.2k
1
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0
replies
11k
views
Comment: Comment: How can I learn create a bioinformatic pipeline?
3.0 years ago by Dave Carlson ★ 2.2k
0
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1
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2.0k
views
Comment: Comment: genotype encoding
3.1 years ago by Dave Carlson ★ 2.2k
0
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1
reply
2.0k
views
Comment: Comment: genotype encoding
3.1 years ago by Dave Carlson ★ 2.2k
2
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2
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2.0k
views
Answer: Answer: genotype encoding
3.1 years ago by Dave Carlson ★ 2.2k
0
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1
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1.4k
views
Answer: Answer: How do I change the path of the bowtie2 temp file
3.1 years ago by Dave Carlson ★ 2.2k
1
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0
replies
1.3k
views
Comment: Comment: How to fix plotMA() error?
3.1 years ago by Dave Carlson ★ 2.2k
2
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2
replies
1.3k
views
Answer: Answer: How to fix plotMA() error?
3.1 years ago by Dave Carlson ★ 2.2k
0
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0
replies
3.2k
views
Comment: Comment: In-paralog & out-paralog
3.1 years ago by Dave Carlson ★ 2.2k
0
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1
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3.2k
views
Answer: Answer: In-paralog & out-paralog
3.1 years ago by Dave Carlson ★ 2.2k
2
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1
reply
3.6k
views
Answer: Answer: phylogeny
updated 22 months ago by 45k • written 3.1 years ago by ★ 2.2k
0
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1
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2.2k
views
Answer: Answer: Best software to edit phylogeny trees
3.2 years ago by Dave Carlson ★ 2.2k
1
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1
reply
1.4k
views
Comment: Comment: RNASeq analysis without reference genome using Trinity
3.2 years ago by Dave Carlson ★ 2.2k
1
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1
reply
3.0k
views
Answer: Answer: Calculate inbreeding coefficient out of ROH (Plink)
3.2 years ago by Dave Carlson ★ 2.2k
1
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0
replies
1.0k
views
Answer: Answer: Identifying reliable regions of reference genomes
3.2 years ago by Dave Carlson ★ 2.2k
2
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1
reply
1.8k
views
Comment: Comment: Reference genome fasta file
3.2 years ago by Dave Carlson ★ 2.2k
4
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1
reply
1.8k
views
Answer: Answer: Reference genome fasta file
3.2 years ago by Dave Carlson ★ 2.2k
2
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1
reply
1.2k
views
Answer: Answer: Bowtie2 and subprocess issue
3.2 years ago by Dave Carlson ★ 2.2k
2
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1
reply
3.9k
views
Answer: Answer: How to check Burrows-Wheeler Aligner (BWA) version on my terminal?
3.2 years ago by Dave Carlson ★ 2.2k
1
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1
reply
3.8k
views
Answer: Answer: Conda environment perl issue
3.2 years ago by Dave Carlson ★ 2.2k
2
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0
replies
3.8k
views
Comment: Comment: AF = 0.5 in chrX, VCF of a male
3.2 years ago by Dave Carlson ★ 2.2k
2
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0
replies
1.4k
views
Answer: Answer: How to create a fasta file using a list of DNA sequences data
3.2 years ago by Dave Carlson ★ 2.2k
0
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0
replies
1.1k
views
Comment: Comment: VCF to MAF using oncotator
3.2 years ago by Dave Carlson ★ 2.2k
2
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1
reply
5.0k
views
Comment: Comment: Updating BLAST+ and PATH variable
3.3 years ago by Dave Carlson ★ 2.2k
3
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1
reply
5.0k
views
Comment: Comment: Updating BLAST+ and PATH variable
3.3 years ago by Dave Carlson ★ 2.2k
5
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1
reply
5.0k
views
Answer: Answer: Updating BLAST+ and PATH variable
3.3 years ago by Dave Carlson ★ 2.2k
0
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1
reply
3.6k
views
Comment: Comment: iqtree output as newick or nexus format
3.3 years ago by Dave Carlson ★ 2.2k
0
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1
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3.6k
views
Answer: Answer: iqtree output as newick or nexus format
3.3 years ago by Dave Carlson ★ 2.2k
1
vote
0
replies
2.3k
views
Comment: Comment: Batch concatenate fastq files in series?
3.3 years ago by Dave Carlson ★ 2.2k
1
vote
1
reply
2.3k
views
Comment: Comment: Batch concatenate fastq files in series?
3.3 years ago by Dave Carlson ★ 2.2k
1
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0
replies
6.9k
views
Comment: Comment: plink2 cannot make bed file
3.3 years ago by Dave Carlson ★ 2.2k
0
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0
replies
2.6k
views
Answer: Answer: Spades
3.3 years ago by Dave Carlson ★ 2.2k
1
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0
replies
3.7k
views
Comment: Comment: how to download all the human protein sequence at once
3.3 years ago by Dave Carlson ★ 2.2k
0
votes
0
replies
663
views
Comment: Comment: Kallisto loop error
3.3 years ago by Dave Carlson ★ 2.2k
4
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1
reply
8.2k
views
Answer: Answer: Looking for a tool which provides mapping quality score distributions from BAM f
4.2 years ago by Dave Carlson ★ 2.2k
0
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0
replies
1.0k
views
Comment: Comment: Does PLINK2 have the function of batch processing ?
4.3 years ago by Dave Carlson ★ 2.2k
0
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0
replies
5.1k
views
Comment: Comment: Statistics analysis of assembled genome from PacBio HiFi reads using Hifiasm
4.5 years ago by Dave Carlson ★ 2.2k
1
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1
reply
5.1k
views
Comment: Comment: Statistics analysis of assembled genome from PacBio HiFi reads using Hifiasm
4.5 years ago by Dave Carlson ★ 2.2k
1
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0
replies
3.0k
views
Comment: Comment: Error in library(preproc) : there is no package called ‘preproc’
4.5 years ago by Dave Carlson ★ 2.2k
0
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1
reply
2.6k
views
Comment: Comment: Generate a file with SNPs given a WGS dataset
4.6 years ago by Dave Carlson ★ 2.2k
227 results • Page 3 of 5
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