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My script is not filtering correctly and it worked previously on 2 datasets
microarray limma genefilter affy
updated 3.9 years ago by 20 • written 8.5 years ago by ▴ 80
1
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2
replies
2.0k
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Pulling TSV automatically from STRINGDB
STRINGDB
updated 4.3 years ago by ▴ 20 • written 7.2 years ago by ▴ 80
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0
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1.6k
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Comment: C: Making a design matrix when the control has a different number of replicates?
updated 4.7 years ago by 44k • written 8.6 years ago by ▴ 80
2
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0
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1.8k
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Answer: A: Example mRNA and miRNA normalised data
updated 4.7 years ago by 44k • written 8.6 years ago by ▴ 80
7
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8
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2.7k
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Automation of R package loading
R bioconductor
updated 2.2 years ago by 44k • written 8.6 years ago by ▴ 80
0
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6
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2.4k
views
Getting the actually expression values in a DEG analysis
limma microarry bioconductor
updated 6.0 years ago by 44k • written 8.6 years ago by ▴ 80
0
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1
reply
5.9k
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Comment: C: Bioconductor as a source for the dependencies of an R package?
updated 6.0 years ago by 44k • written 8.6 years ago by ▴ 80
0
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1
reply
5.9k
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Comment: C: Bioconductor as a source for the dependencies of an R package?
updated 6.0 years ago by 44k • written 8.6 years ago by ▴ 80
0
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1
reply
2.2k
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Removing control probes from hugene20st arrays
microarry hugenest20 limma
updated 2.2 years ago by 44k • written 8.6 years ago by ▴ 80
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0
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1.8k
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Comment: C: Merging two datasets related to protiens and calculating the molec weight
7.3 years ago by hakimelakhrass ▴ 80
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2
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1.8k
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Merging two datasets related to protiens and calculating the molec weight
R data protein
7.3 years ago by hakimelakhrass ▴ 80
0
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0
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5.7k
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Comment: C: PCAs, how to interpret the scale of the axis
7.4 years ago by hakimelakhrass ▴ 80
1
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1
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5.7k
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Answer: A: PCAs, how to interpret the scale of the axis
7.4 years ago by hakimelakhrass ▴ 80
1
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3
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1.6k
views
Sequence aligment within R data frame
R proteins
7.4 years ago by hakimelakhrass ▴ 80
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0
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1.6k
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Comment: C: Sequence aligment within R data frame
7.4 years ago by hakimelakhrass ▴ 80
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0
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1.6k
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Comment: C: Sequence aligment within R data frame
7.4 years ago by hakimelakhrass ▴ 80
0
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0
replies
1.0k
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Pulling Protien Genbank files and All of it's isoforms from NCBI
R NCBI Genbank
7.4 years ago by hakimelakhrass ▴ 80
0
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0
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3.0k
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Comment: C: How to append a data.frame in R with new data
7.5 years ago by hakimelakhrass ▴ 80
3
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6
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3.0k
views
How to append a data.frame in R with new data
R Genebank NCBI protiens
updated 16 months ago by 44k • written 7.5 years ago by ▴ 80
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1.9k
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Comment: C: How to calculate the mass of whole protiens and sub regions?
7.5 years ago by hakimelakhrass ▴ 80
0
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2
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1.9k
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Comment: C: How to calculate the mass of whole protiens and sub regions?
7.5 years ago by hakimelakhrass ▴ 80
2
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5
replies
1.9k
views
How to calculate the mass of whole protiens and sub regions?
R protiens Amino Acids ExPASY
7.5 years ago by hakimelakhrass ▴ 80
0
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1
reply
1.7k
views
Affymetrix automatically getting the bed file
affymetrix BED
updated 8.0 years ago by • 0 • written 8.5 years ago by ▴ 80
0
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0
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3.0k
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Comment: C: Design Matrix for Limma
8.3 years ago by hakimelakhrass ▴ 80
0
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0
replies
3.0k
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Comment: C: Design Matrix for Limma
8.3 years ago by hakimelakhrass ▴ 80
0
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5
replies
3.0k
views
Design Matrix for Limma
R Limma Microarray Affymetrix
updated 8.3 years ago by 104k • written 8.3 years ago by ▴ 80
2
votes
2
replies
2.3k
views
Does the order of the RMA algorithm make a difference in results?
R microarry affymetrix oligo
updated 8.3 years ago by ▴ 270 • written 8.3 years ago by ▴ 80
2
votes
1
reply
1.4k
views
arrayQualityMetrics package in bioconductor for whole genome trancriptomics?
R microarry affy
updated 8.3 years ago by ▴ 680 • written 8.4 years ago by ▴ 80
20
votes
2
replies
74k
views
Subsetting in R based on row name?
R
updated 8.4 years ago by 104k • written 8.4 years ago by ▴ 80
7
votes
14
replies
5.9k
views
8 follow
Bioconductor as a source for the dependencies of an R package?
R bioconductor
updated 16 months ago by ▴ 30 • written 8.6 years ago by ▴ 80
0
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0
replies
1.8k
views
Comment: C: Analysis ideas for a list of DEG with a lot of unannotated regions?
8.5 years ago by hakimelakhrass ▴ 80
0
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2
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1.8k
views
Analysis ideas for a list of DEG with a lot of unannotated regions?
R DEG microarray
updated 8.5 years ago by ▴ 860 • written 8.5 years ago by ▴ 80
1
vote
1
reply
1.4k
views
Interreplicate statistics for microarray data?
affymetrix microarray limma
updated 8.5 years ago by ★ 2.3k • written 8.5 years ago by ▴ 80
0
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0
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2.4k
views
Comment: C: Getting the actually expression values in a DEG analysis
8.6 years ago by hakimelakhrass ▴ 80
0
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1
reply
2.4k
views
Comment: C: Getting the actually expression values in a DEG analysis
8.6 years ago by hakimelakhrass ▴ 80
0
votes
0
replies
2.4k
views
Comment: C: Getting the actually expression values in a DEG analysis
8.6 years ago by hakimelakhrass ▴ 80
0
votes
0
replies
2.7k
views
Comment: C: Automation of R package loading
8.6 years ago by hakimelakhrass ▴ 80
0
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0
replies
2.7k
views
Comment: C: Automation of R package loading
8.6 years ago by hakimelakhrass ▴ 80
0
votes
0
replies
2.7k
views
Comment: Comment: Automation of R package loading
updated 2.2 years ago by 44k • written 8.6 years ago by ▴ 80
0
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0
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2.7k
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Comment: C: Automation of R package loading
8.6 years ago by hakimelakhrass ▴ 80
0
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0
replies
2.0k
views
Comment: Comment: Interpretation of limma out put with multiple contrasts
updated 2.2 years ago by 44k • written 8.6 years ago by ▴ 80
0
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0
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2.0k
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Comment: C: Interpretation of limma out put with multiple contrasts
8.6 years ago by hakimelakhrass ▴ 80
0
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3
replies
2.0k
views
Interpretation of limma out put with multiple contrasts
hugenest20 limma microarray
updated 2.2 years ago by 44k • written 8.6 years ago by ▴ 80
0
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0
replies
1.6k
views
Comment: C: Making a design matrix when the control has a different number of replicates?
8.6 years ago by hakimelakhrass ▴ 80
2
votes
8
replies
1.6k
views
Making a design matrix when the control has a different number of replicates?
limma hugene20st
updated 8.6 years ago by 6.6k • written 8.6 years ago by ▴ 80
0
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1
reply
2.6k
views
Comment: C: Design matrix for limma
8.6 years ago by hakimelakhrass ▴ 80
1
vote
3
replies
2.6k
views
Design matrix for limma
hugene20st limma microarray
updated 2.2 years ago by 44k • written 8.6 years ago by ▴ 80
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