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11
votes
8
replies
7.8k
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7 follow
Best Bioinformatic And Molecular Biology Software Package
software molecular viewer subjective
updated 10.9 years ago by • 0 • written 14.1 years ago by 11k
0
votes
0
replies
39k
views
Comment: Comment: I loaded a BAM (RNA-seq) file into IGV but cant see anything!
updated 3.7 years ago by 45k • written 11.0 years ago by 11k
2
votes
1
reply
39k
views
Comment: Comment: I loaded a BAM (RNA-seq) file into IGV but cant see anything!
updated 3.7 years ago by 45k • written 11.0 years ago by 11k
6
votes
6
replies
3.4k
views
How to represent multiple p-values ?
p-values plot
updated 3.8 years ago by 45k • written 11.0 years ago by 11k
0
votes
1
reply
3.4k
views
Comment: C: How to represent multiple p-values ?
11.0 years ago by Nicolas Rosewick 11k
0
votes
1
reply
3.4k
views
Comment: Comment: How to represent multiple p-values ?
updated 3.8 years ago by 45k • written 11.0 years ago by 11k
3
votes
1
reply
21k
views
Answer: Answer: how to use log transformation with read count data?
updated 4.6 years ago by 45k • written 11.1 years ago by 11k
2
votes
1
reply
1.5k
views
Recent sequencing platform comparison
plateform sequencing
updated 4.6 years ago by 45k • written 11.1 years ago by 11k
2
votes
0
replies
1.5k
views
Answer: Answer: Recent sequencing platform comparison
updated 4.6 years ago by 45k • written 11.1 years ago by 11k
1
vote
1
reply
3.5k
views
Estimate alternative splicing rate using RNA-Seq
RNA-Seq alternativesplicing
updated 4.6 years ago by 45k • written 11.1 years ago by 11k
0
votes
0
replies
4.5k
views
Comment: Comment: Filteration of 0 counts in all column of the htseq-count metrics and add pseudo
updated 2.7 years ago by 45k • written 11.1 years ago by 11k
0
votes
1
reply
7.9k
views
Comment: C: Length of miRNA reads after preprocessing steps
11.1 years ago by Nicolas Rosewick 11k
1
vote
1
reply
4.5k
views
Answer: Answer: Filteration of 0 counts in all column of the htseq-count metrics and add pseudo
updated 2.7 years ago by 45k • written 11.1 years ago by 11k
0
votes
2
replies
6.1k
views
Comment: Comment: DESeq2 : foldchange calculation with multi-factor design
updated 4.6 years ago by 45k • written 11.1 years ago by 11k
3
votes
4
replies
6.1k
views
DESeq2 : foldchange calculation with multi-factor design
multifactor deseq2
updated 4.6 years ago by 45k • written 11.1 years ago by 11k
1
vote
2
replies
26k
views
Comment: C: htseq-counts output merge into one matrix ??
11.1 years ago by Nicolas Rosewick 11k
0
votes
0
replies
29k
views
Comment: Comment: DESeq2 : three factor conditions
updated 3.8 years ago by 45k • written 11.1 years ago by 11k
3
votes
1
reply
29k
views
Comment: Comment: DESeq2 : three factor conditions
updated 3.8 years ago by 45k • written 11.1 years ago by 11k
37
votes
8
replies
29k
views
DESeq2 : three factor conditions
mulitpleconditions DESeq2
updated 3.8 years ago by 45k • written 11.1 years ago by 11k
8
votes
5
replies
6.0k
views
How to download a specific sample from TCGA ?
tcga
updated 4.6 years ago by 45k • written 11.1 years ago by 11k
1
vote
5
replies
2.5k
views
Functional consequences of a mutated gene using RNA-Seq
mutation RNA-Seq pathway
updated 3.8 years ago by 45k • written 11.2 years ago by 11k
2
votes
0
replies
3.0k
views
Answer: Answer: Where to download In-vitro RNA-seq published experiments?
updated 3.9 years ago by 45k • written 11.2 years ago by 11k
0
votes
1
reply
4.1k
views
Comment: Comment: Common target genes
updated 3.9 years ago by 45k • written 11.2 years ago by 11k
2
votes
4
replies
4.1k
views
Common target genes
genes pathway target
updated 3.9 years ago by 45k • written 11.2 years ago by 11k
0
votes
1
reply
19k
views
Comment: Comment: samtools: writing to standard output failed: Broken pipe
updated 3.9 years ago by 45k • written 11.2 years ago by 11k
2
votes
5
replies
11k
views
bigwig : peak distance from specific genomic region
ChIP-Seq bigwig distance closest bed
updated 4.0 years ago by 45k • written 11.4 years ago by 11k
0
votes
1
reply
3.8k
views
Comment: Comment: How to assign manually biological function into nodes in Cytoscape?
updated 3.9 years ago by 45k • written 11.2 years ago by 11k
4
votes
1
reply
3.8k
views
Answer: Answer: How to assign manually biological function into nodes in Cytoscape?
updated 3.9 years ago by 45k • written 11.2 years ago by 11k
0
votes
1
reply
7.0k
views
Comment: Comment: Gene regulatory networks from RNA-seq data
updated 3.9 years ago by 45k • written 11.2 years ago by 11k
0
votes
1
reply
2.5k
views
Comment: C: Functional consequences of a mutated gene using RNA-Seq
11.2 years ago by Nicolas Rosewick 11k
0
votes
0
replies
5.3k
views
Comment: Comment: DESeq input preparation
updated 3.1 years ago by 45k • written 11.2 years ago by 11k
4
votes
9
replies
4.4k
views
6 follow
Small Genome Mapping Assembly
genome assembly mapping
updated 3.9 years ago by 45k • written 14.0 years ago by 11k
0
votes
0
replies
3.0k
views
Comment: Comment: How to group/merge genomic positions ?
updated 3.9 years ago by 45k • written 11.3 years ago by 11k
0
votes
1
reply
3.0k
views
Comment: Comment: How to group/merge genomic positions ?
updated 3.9 years ago by 45k • written 11.3 years ago by 11k
0
votes
1
reply
13k
views
Comment: Comment: DESeq2 very high p-values and padj
updated 3.9 years ago by 45k • written 11.3 years ago by 11k
3
votes
6
replies
3.0k
views
How to group/merge genomic positions ?
group position genomic
updated 3.9 years ago by 45k • written 11.3 years ago by 11k
0
votes
0
replies
3.0k
views
Comment: C: How to group/merge genomic positions ?
11.3 years ago by Nicolas Rosewick 11k
1
vote
0
replies
3.7k
views
Answer: Answer: k-mer analysis in RNA-seq
updated 3.9 years ago by 45k • written 11.3 years ago by 11k
0
votes
1
reply
3.4k
views
Comment: Comment: how to extract all the genes regulated by a specific gene ?
updated 3.9 years ago by 45k • written 11.3 years ago by 11k
0
votes
0
replies
3.4k
views
Comment: Comment: how to extract all the genes regulated by a specific gene ?
updated 3.9 years ago by 45k • written 11.3 years ago by 11k
3
votes
4
replies
3.4k
views
how to extract all the genes regulated by a specific gene ?
pathway reactome kegg gene target
updated 3.9 years ago by 45k • written 11.3 years ago by 11k
0
votes
0
replies
3.1k
views
Downstream target genes expression analysis (RNA-Seq)
RNA-Seq downstream targets expression
11.3 years ago by Nicolas Rosewick 11k
15
votes
7
replies
18k
views
Multi Thread Bedtools
bedtools parallel
updated 11.4 years ago by 20 • written 13.9 years ago by 11k
0
votes
0
replies
26k
views
Comment: C: bigwig to peak
11.4 years ago by Nicolas Rosewick 11k
0
votes
1
reply
3.1k
views
Chip-Seq : how to test if several genomic regions are enriched in histone marks
encode enrichment ChIP-Seq peaks bigwig
updated 4.0 years ago by 45k • written 11.4 years ago by 11k
0
votes
0
replies
11k
views
Comment: Comment: bigwig : peak distance from specific genomic region
updated 4.0 years ago by 45k • written 11.4 years ago by 11k
0
votes
0
replies
11k
views
Comment: C: bigwig : peak distance from specific genomic region
11.4 years ago by Nicolas Rosewick 11k
0
votes
0
replies
2.3k
views
Comment: Comment: Genomic positions enrichement in enhancer
updated 4.0 years ago by 45k • written 11.4 years ago by 11k
0
votes
1
reply
2.3k
views
Comment: Comment: Genomic positions enrichement in enhancer
updated 4.0 years ago by 45k • written 11.4 years ago by 11k
3
votes
4
replies
2.3k
views
Genomic positions enrichement in enhancer
enrichment position ENCODE
updated 4.0 years ago by 45k • written 11.4 years ago by 11k
1,080 results • Page 16 of 22
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