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Comment: Comment: Insert Size And Fragment Size ?
4.0 years ago by Nicolas Rosewick 11k
1
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4.6k
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Comment: Comment: DESeq2 normalization - Found Difference in values when calculated manually
4.2 years ago by Nicolas Rosewick 11k
0
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1
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2.3k
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Comment: Comment: Best practice for running GATK VQSR on X chromosome
4.3 years ago by Nicolas Rosewick 11k
7
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2
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7.2k
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Trinity : How To Co-Assemble Different Samples (Tumor And Healthy)
trinity assembly transcriptome
updated 4.4 years ago by ▴ 20 • written 13.7 years ago by 11k
0
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1
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1.7k
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Answer: Answer: Exclude non shared SNPs from two datasets with PLINK
4.4 years ago by Nicolas Rosewick 11k
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2.1k
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Comment: Comment: Genepop for LD testing SNPs dataset
4.5 years ago by Nicolas Rosewick 11k
0
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1
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2.1k
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Comment: Comment: Genepop for LD testing SNPs dataset
4.5 years ago by Nicolas Rosewick 11k
3
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1
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2.1k
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Answer: Answer: High confident germline SNP and INDELS for VQSR for reference genome GRCh37
4.5 years ago by Nicolas Rosewick 11k
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1
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2.7k
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Comment: Comment: Understanding GATK evaluation metrics
4.6 years ago by Nicolas Rosewick 11k
0
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1
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1.5k
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Comment: C: How to generate dotplot using the lastz output file
4.7 years ago by Nicolas Rosewick 11k
0
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1
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3.3k
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Comment: C: plink : Batch effect issues after merge of two datasets
4.7 years ago by Nicolas Rosewick 11k
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1
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3.3k
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Comment: C: plink : Batch effect issues after merge of two datasets
4.7 years ago by Nicolas Rosewick 11k
1
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1
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1.9k
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Answer: A: Setting a threshold based on effective number of independent Snps in GWAS.
4.8 years ago by Nicolas Rosewick 11k
1
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0
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2.7k
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Comment: C: Help Compiling STAR
4.9 years ago by Nicolas Rosewick 11k
9
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5
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10k
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R : How To Compute The Melting Temperature Tm
r
updated 3.5 years ago by ▴ 90 • written 13.0 years ago by 11k
0
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0
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937
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Where to find SNP genotype information for ENCODE samples
encode genotype
5.0 years ago by Nicolas Rosewick 11k
0
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1
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1.9k
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Comment: C: Should the number of significantly DE genes rise with the number of SVs estimate
5.0 years ago by Nicolas Rosewick 11k
0
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1
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8.2k
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Comment: C: increase spacing between groups in a bar plot
5.1 years ago by Nicolas Rosewick 11k
0
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1
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8.2k
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Comment: C: increase spacing between groups in a bar plot
5.1 years ago by Nicolas Rosewick 11k
2
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0
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1.5k
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Comment: C: Strange plots I got from R studio
5.1 years ago by Nicolas Rosewick 11k
14
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2
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13k
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Answer: A: What is the VEP Impact column?
5.1 years ago by Nicolas Rosewick 11k
1
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0
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3.4k
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Comment: C: RNA seq data analysis and building co expression network
5.1 years ago by Nicolas Rosewick 11k
0
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1
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1.7k
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Comment: C: Weird results in TopHat2 paired-end alignment
5.1 years ago by Nicolas Rosewick 11k
0
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1
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2.2k
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Comment: C: GWAS results and linkage disequilibrium issue
5.1 years ago by Nicolas Rosewick 11k
0
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1
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1.2k
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Comment: C: converting vcf into simpler version for downstream analysis
5.1 years ago by Nicolas Rosewick 11k
0
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0
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7.3k
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Comment: C: Subset VCF file by comparing CHROM,POS,REF and ALT
5.2 years ago by Nicolas Rosewick 11k
0
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0
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2.8k
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Comment: C: separate the figure
5.2 years ago by Nicolas Rosewick 11k
0
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1
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3.2k
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Comment: C: How I can describe ridgeplot?
5.2 years ago by Nicolas Rosewick 11k
0
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1
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3.2k
views
Comment: C: How I can describe ridgeplot?
5.2 years ago by Nicolas Rosewick 11k
2
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1
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1.7k
views
Answer: A: BWA alignement for RNA Seq
5.2 years ago by Nicolas Rosewick 11k
1
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0
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1.4k
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Comment: C: Problems removing a subset of individuals from ped files
5.2 years ago by Nicolas Rosewick 11k
0
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0
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924
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Answer: A: Gene expression variability
5.3 years ago by Nicolas Rosewick 11k
2
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1
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7.4k
views
Answer: A: change axis scale on ggplot2
5.3 years ago by Nicolas Rosewick 11k
1
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0
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1.6k
views
Answer: A: Permutation test (randomisation test) help - any advice appreciated
5.3 years ago by Nicolas Rosewick 11k
1
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1
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3.5k
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Comment: C: Imputation results from TOPMED server
5.3 years ago by Nicolas Rosewick 11k
1
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1
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3.5k
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Comment: C: Imputation results from TOPMED server
5.3 years ago by Nicolas Rosewick 11k
2
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1
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3.7k
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Answer: A: How to make box plot for different gene types
5.3 years ago by Nicolas Rosewick 11k
0
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0
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2.0k
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Comment: C: Reverse allele frequency
5.3 years ago by Nicolas Rosewick 11k
0
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1
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2.0k
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Comment: C: Reverse allele frequency
5.3 years ago by Nicolas Rosewick 11k
0
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1
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1.4k
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Comment: C: Plots for gene expression data
5.3 years ago by Nicolas Rosewick 11k
2
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1
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3.4k
views
Comment: C: Calculate p-value from Weibull distribution?
5.3 years ago by Nicolas Rosewick 11k
0
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0
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1.4k
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Comment: C: population stratification using PLINK
5.3 years ago by Nicolas Rosewick 11k
0
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1
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1.2k
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Comment: C: Chromosome position sample files merging in R
5.3 years ago by Nicolas Rosewick 11k
0
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0
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987
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Comment: C: Population stratification with PLINK
5.3 years ago by Nicolas Rosewick 11k
1
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2
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1.7k
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Answer: A: p value for permutation test for gene-interaction data
5.3 years ago by Nicolas Rosewick 11k
1
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0
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875
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Spatial Transcriptomics : Compute expression correlation between two adjacent slides (technical replicates)
spatial transcriptomics
5.3 years ago by Nicolas Rosewick 11k
1
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0
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2.0k
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Answer: A: tabix on 1000genome files
5.4 years ago by Nicolas Rosewick 11k
1
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1
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1.1k
views
Comment: C: How to create MAplot in R for only one sample?
5.4 years ago by Nicolas Rosewick 11k
0
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0
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1.1k
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Comment: C: Multiple hypothesis testing
5.4 years ago by Nicolas Rosewick 11k
0
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1
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3.4k
views
Answer: A: RNA seq data analysis and building co expression network
5.4 years ago by Nicolas Rosewick 11k
1,080 results • Page 2 of 22
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