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4.6k
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Comment: C: PCA: log transform and scale=T/F?
5.4 years ago by Nicolas Rosewick 11k
0
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1
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3.3k
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Answer: A: Getting the db SNP VCF file for GRCh38.p13
5.4 years ago by Nicolas Rosewick 11k
1
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1
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1.5k
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Comment: C: gnoMAD mutation and essential gene
5.5 years ago by Nicolas Rosewick 11k
7
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1
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4.4k
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How to force GATK haplotypecaller to output all genomic position (even non variant positions)
GATK haplotypecaller
updated 5.5 years ago by ▴ 900 • written 5.5 years ago by 11k
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2
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1.6k
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Comment: C: how to find candidate genes using linear regression in R
5.5 years ago by Nicolas Rosewick 11k
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1
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1.7k
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Comment: C: Structural variation germline vs somatic ?
5.6 years ago by Nicolas Rosewick 11k
0
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0
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1.2k
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Comment: C: bam file: get date that alignment was run
5.6 years ago by Nicolas Rosewick 11k
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6.7k
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Comment: C: Use padj instead of p-value to ploting DE genes using EnhancedVolcano
5.6 years ago by Nicolas Rosewick 11k
4
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3
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3.1k
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vcfanno: issues to annotate VCF with gnomAD r3.0
vcfanno gnomAD
updated 5.6 years ago by 45k • written 5.6 years ago by 11k
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0
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3.1k
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Comment: C: [SOLVED] vcfanno: issues to annotate VCF with gnomAD r3.0
5.6 years ago by Nicolas Rosewick 11k
1
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0
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3.1k
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Answer: A: [SOLVED] vcfanno: issues to annotate VCF with gnomAD r3.0
5.6 years ago by Nicolas Rosewick 11k
0
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0
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1.6k
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Comment: C: Retrieving multiple regions (from a list) in a bam file and outputing as a table
5.7 years ago by Nicolas Rosewick 11k
0
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1
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1.6k
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Comment: C: Retrieving multiple regions (from a list) in a bam file and outputing as a table
5.7 years ago by Nicolas Rosewick 11k
2
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0
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7.2k
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Answer: A: Trying To Pull Regions From An Online Bam File Without Downloading
5.7 years ago by Nicolas Rosewick 11k
1
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1
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4.8k
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Comment: C: script in R to convert DNA to RNA sequence
5.7 years ago by Nicolas Rosewick 11k
0
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0
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1.1k
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Genome Nexus : API access through R
Genome Nexus API R
5.7 years ago by Nicolas Rosewick 11k
25
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16
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13k
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GenomicRanges : How to reduce a GRanges by gene
genomicranges granges reduce R
updated 5.7 years ago by 90k • written 6.4 years ago by 11k
0
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1
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3.9k
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Comment: C: feature selection using random forest
5.7 years ago by Nicolas Rosewick 11k
0
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0
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1.6k
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Comment: C: Cutdapt for batch processing ?
5.7 years ago by Nicolas Rosewick 11k
0
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0
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911
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Answer: A: How to determine the list of all genes (at least expressed once in RNA Seq Exper
5.8 years ago by Nicolas Rosewick 11k
0
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1
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6.1k
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Comment: C: GSVA on RNAseq data (GTEX)
5.8 years ago by Nicolas Rosewick 11k
0
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0
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1.6k
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Comment: C: Scatter / Gather for BaseRecalibrator on a single human WES dataset?
5.8 years ago by Nicolas Rosewick 11k
0
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1
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4.0k
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Comment: C: Should I keep up with random contigs in human genome
5.8 years ago by Nicolas Rosewick 11k
2
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0
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2.9k
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Comment: C: Remove duplicate reads before variant calling?
5.8 years ago by Nicolas Rosewick 11k
1
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0
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2.5k
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Comment: C: Should I merge the Paired-end RNA-seq reads for BLAT for intron identification
5.8 years ago by Nicolas Rosewick 11k
0
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1
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2.5k
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Answer: A: Should I merge the Paired-end RNA-seq reads for BLAT
5.8 years ago by Nicolas Rosewick 11k
0
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1
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3.6k
views
Comment: C: Student's t-test (For Paired samples) calculation
updated 5.8 years ago by 45k • written 9.8 years ago by 11k
1
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1
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3.6k
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Answer: A: Student's t-test (For Paired samples) calculation
updated 5.8 years ago by 45k • written 9.8 years ago by 11k
0
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1
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5.8k
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Comment: C: What causes tophat_reports error?
updated 5.9 years ago by 45k • written 11.5 years ago by 11k
4
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0
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3.2k
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Extract gnomad AF for specific position and REF/ALT allele with R
R gnomad af allele frequency annotation
5.9 years ago by Nicolas Rosewick 11k
0
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0
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3.3k
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Comment: C: samtools + map
updated 5.9 years ago by 45k • written 11.6 years ago by 11k
1
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0
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4.2k
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Answer: A: How will i map exons (FASTA Format) onto human genome to get the genomic coordin
updated 5.9 years ago by 45k • written 11.6 years ago by 11k
0
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0
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8.9k
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Comment: C: Pick random position from specific genomic regions
updated 5.9 years ago by 45k • written 11.6 years ago by 11k
0
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0
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8.9k
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Comment: C: Pick random position from specific genomic regions
updated 5.9 years ago by 45k • written 11.6 years ago by 11k
0
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1
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8.9k
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Comment: C: Pick random position from specific genomic regions
updated 5.9 years ago by 45k • written 11.6 years ago by 11k
0
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1
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1.7k
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Comment: C: Homozygot genotype information but SNP is heterozygous
5.9 years ago by Nicolas Rosewick 11k
2
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1
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9.0k
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Comment: C: How to TMM after HTSeq-count?
updated 5.9 years ago by 45k • written 9.9 years ago by 11k
0
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1
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1.1k
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Comment: C: Overlap two variable
5.9 years ago by Nicolas Rosewick 11k
1
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1
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5.7k
views
Answer: A: Find closest gene to chromosome location
updated 5.9 years ago by 45k • written 10.0 years ago by 11k
0
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0
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1.1k
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Comment: C: grouping of maf results in GWAS
5.9 years ago by Nicolas Rosewick 11k
1
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0
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1.4k
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Answer: A: Creating a set of rare variants shared by a child and a parents with VCF and Tab
5.9 years ago by Nicolas Rosewick 11k
0
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0
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9.5k
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Comment: C: Bwa Specify Number Of Maximum Mismatches And Gaps
updated 6.0 years ago by 45k • written 14.0 years ago by 11k
2
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0
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1.8k
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Answer: C: How could I get population or individual specific genotypes from multi sample VC
6.0 years ago by Nicolas Rosewick 11k
1
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0
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1.5k
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Answer: A: Technical challenges inherent to WES processing - any recommended review sources
6.0 years ago by Nicolas Rosewick 11k
0
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0
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4.2k
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Comment: C: The best aligner to align RNA-Seq data into mitochondria genome
updated 6.0 years ago by 45k • written 10.0 years ago by 11k
0
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1
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1.5k
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Comment: C: GWAS result too significant
6.0 years ago by Nicolas Rosewick 11k
0
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1
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2.3k
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Comment: C: Germline - somatic mutation co-occurrence analysis
6.0 years ago by Nicolas Rosewick 11k
0
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1
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2.3k
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Comment: C: Germline - somatic mutation co-occurrence analysis
6.0 years ago by Nicolas Rosewick 11k
5
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5
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2.3k
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Germline - somatic mutation co-occurrence analysis
mutation co-occurrence
6.0 years ago by Nicolas Rosewick 11k
1
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1
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9.4k
views
Answer: A: Plotting a line graph using the ggplot2 for multiple columns (genes)
6.0 years ago by Nicolas Rosewick 11k
1,080 results • Page 3 of 22
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