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Comment: C: Get counts for allele specific expression analysis
4.5 years ago by grant.hovhannisyan ★ 2.6k
1
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1
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2.3k
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Comment: C: Allelic-Specific RNA-Seq pipeline
4.5 years ago by grant.hovhannisyan ★ 2.6k
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1
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2.3k
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Comment: C: Allelic-Specific RNA-Seq pipeline
4.5 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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2.3k
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Comment: C: Allelic-Specific RNA-Seq pipeline
4.5 years ago by grant.hovhannisyan ★ 2.6k
2
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1
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2.3k
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Answer: A: Allelic-Specific RNA-Seq pipeline
4.5 years ago by grant.hovhannisyan ★ 2.6k
2
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0
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1.5k
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Comment: C: Is reproducibility of identified variants in a gene important in Sanger sequenci
4.5 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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2.5k
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Comment: C: Low mapping rate for human NGS PE reads to hs37d5 genome
4.5 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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1.3k
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Comment: C: NGS data analysis training
4.5 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.3k
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Comment: C: Heterozygous genome size estimation using k-mer analysis
4.6 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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1.3k
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Answer: A: Heterozygous genome size estimation using k-mer analysis
4.6 years ago by grant.hovhannisyan ★ 2.6k
1
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0
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2.3k
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Answer: A: Genome vs transcriptome alignement in STAR
4.6 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.2k
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Answer: A: Is it possible to detect lncRNA in a de novo assembled genome?
4.6 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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4.0k
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Comment: C: Atypical Volcano plot of RNAseq data
4.6 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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2.6k
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Comment: C: Why I have too many reads non uniquely aligned?
4.6 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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3.4k
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Comment: C: Normalization of allele specific counts in RNA-seq
4.7 years ago by grant.hovhannisyan ★ 2.6k
3
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2
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3.4k
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Answer: A: Normalization of allele specific counts in RNA-seq
4.7 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.9k
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Comment: C: Do varying amounts of input RNA for library preperation have an effect on differ
4.7 years ago by grant.hovhannisyan ★ 2.6k
1
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0
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2.4k
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Comment: C: How to index a large fasta file (>100GB) by using bowtie2-build
4.7 years ago by grant.hovhannisyan ★ 2.6k
1
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0
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974
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Comment: C: transcript assembling problem by cufflinks
4.7 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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974
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Comment: C: transcript assembling problem by cufflinks
4.7 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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863
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Comment: C: Introducing Crossmapper pipeline
4.7 years ago by grant.hovhannisyan ★ 2.6k
2
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2
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863
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Tool: Introducing Crossmapper pipeline
NGS experimental-design
updated 10 months ago by 43k • written 4.7 years ago by ★ 2.6k
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0
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1.0k
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Comment: C: probability of observing overlap between sets of genes
4.7 years ago by grant.hovhannisyan ★ 2.6k
0
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2
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1.3k
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collapseReplicates changes the order of the original dataframe in DESeq2
DESeq2 collapseReplicates
4.8 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.3k
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Answer: A: collapseReplicates changes the order of the original dataframe in DESeq2
4.8 years ago by grant.hovhannisyan ★ 2.6k
2
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0
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1.2k
views
Comment: C: Doing differential gene expression without knowing sample classes
4.8 years ago by grant.hovhannisyan ★ 2.6k
2
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0
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986
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Answer: A: How to find out human mtDNA genes in d-loop control region for Indian origin onl
4.8 years ago by grant.hovhannisyan ★ 2.6k
2
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1
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12k
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Answer: C: How to order bars in barplot in ggplot?
updated 4.8 years ago by 11k • written 4.8 years ago by ★ 2.6k
0
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1
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892
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Comment: C: Looking for Yeast transcription factor - target gene matrix with weights (activa
4.9 years ago by grant.hovhannisyan ★ 2.6k
1
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1
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1.3k
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Comment: C: Relevance of RNAseq meta-analysis
4.9 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.2k
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Comment: C: normalization with RPKM
4.9 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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1.2k
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Comment: C: normalization with RPKM
4.9 years ago by grant.hovhannisyan ★ 2.6k
1
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1
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1.0k
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Answer: A: Dual rnaseq normalization
5.0 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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18k
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Comment: C: Bwa Mem Have Different Alignment Result When Using Different Threads
5.0 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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18k
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Comment: C: Bwa Mem Have Different Alignment Result When Using Different Threads
5.0 years ago by grant.hovhannisyan ★ 2.6k
2
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0
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1.6k
views
Comment: A: 10 Most important topic in Human evolutionary genomics
5.0 years ago by grant.hovhannisyan ★ 2.6k
0
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2
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18k
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Comment: C: Bwa Mem Have Different Alignment Result When Using Different Threads
5.0 years ago by grant.hovhannisyan ★ 2.6k
0
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3
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18k
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Answer: A: Bwa Mem Have Different Alignment Result When Using Different Threads
5.0 years ago by grant.hovhannisyan ★ 2.6k
2
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0
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8.2k
views
Comment: C: Who are the Greatest Bioinformaticians Of All Time (GBOAT)
5.1 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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5.5k
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Comment: C: How to combine multiple data files by column names?
5.1 years ago by grant.hovhannisyan ★ 2.6k
2
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1
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5.5k
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Answer: A: How to combine multiple data files by column names?
updated 5.1 years ago by 11k • written 5.1 years ago by ★ 2.6k
0
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0
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21k
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Comment: C: Converting Gene Ontology Names To Go Ids
5.1 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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2.8k
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Comment: C: removing confounding batch effect with RUVseq
5.1 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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4.4k
views
Comment: C: relevel the clusterProfiler object
5.1 years ago by grant.hovhannisyan ★ 2.6k
1
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4
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2.8k
views
removing confounding batch effect with RUVseq
RUVseq RNA-Seq batch-effect DESeq2
updated 9 days ago by 43k • written 5.1 years ago by ★ 2.6k
2
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0
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3.9k
views
Answer: A: ClusterProfiler fails to find GO terms
5.1 years ago by grant.hovhannisyan ★ 2.6k
5
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4
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3.9k
views
ClusterProfiler fails to find GO terms
RNA-Seq GO clusterProfiler
updated 2.7 years ago by • 0 • written 5.1 years ago by ★ 2.6k
0
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0
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3.9k
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Comment: C: ClusterProfiler fails to find GO terms
5.1 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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2.8k
views
Comment: C: removing confounding batch effect with RUVseq
5.1 years ago by grant.hovhannisyan ★ 2.6k
0
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1
reply
1.4k
views
Comment: C: If I have a hybrid yeast strain sequenced, is it okay to use saccer3 as referenc
5.1 years ago by grant.hovhannisyan ★ 2.6k
458 results • Page 3 of 10
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