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Showing :
questions
5
votes
3
replies
1.6k
views
What Statistical Test should I use to compare count data (mutation gene count) using two grouping variables?
count-data
SNV
mutation-count
mean-comparison
regression
2.8 years ago by
salvatore.digiorgio
▴ 10
1
vote
3
replies
2.5k
views
Qualimap problem with Region.bed file
sequencing
alignment
5.9 years ago by
salvatore.digiorgio
▴ 10
3
votes
3
replies
2.1k
views
Issue with Demultiplex dual indexed Illumina reads using bcl2fastq, for beginners.
index
bcl2fastq
demultiplexing
5.9 years ago by
salvatore.digiorgio
▴ 10
1
vote
9
replies
1.7k
views
What's the possible causes of Unbalanced strand mapping in RNA-seq?
RNA-Seq
strand bias
6.2 years ago by
salvatore.digiorgio
▴ 10
4
votes
2
replies
1.2k
views
SNPs based on cDNA sequence could be artifacts of RNA editing
SNP
RNA
updated 6.3 years ago by
Kevin Blighe
88k • written 6.3 years ago by
salvatore.digiorgio
▴ 10
4
votes
4
replies
2.7k
views
Question: Rna Raw Count and Gene expression correlation
RNA-Seq
EdgeR
TCGAbiolinks
updated 7.0 years ago by
lessismore
★ 1.4k • written 7.0 years ago by
salvatore.digiorgio
▴ 10
0
votes
4
replies
1.7k
views
Samtools pileup problem.
RNA-Seq
pileup
7.1 years ago by
salvatore.digiorgio
▴ 10
1
vote
0
replies
1.4k
views
Question: Mutect 2 and related vcf in TCGA
Mutect2
TCGA
GDC
7.3 years ago by
salvatore.digiorgio
▴ 10
0
votes
2
replies
2.3k
views
tcga slice bam downloading problem
RNA-seq
tcga
slice_bam
curl
updated 7.3 years ago by
muraveill
• 0 • written 7.4 years ago by
salvatore.digiorgio
▴ 10
5
votes
7
replies
2.5k
views
How to obtain the non-redundant total size of the GRCh38 genome?
exome
updated 18 months ago by
Ram
44k • written 7.8 years ago by
salvatore.digiorgio
▴ 10
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