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Getting additional positive regulons on enabling --all_modules option in pySCENIC
BioinformaticsTool Regulon scRNA-Seq SCENIC GRN pySCENIC
3 months ago by Nitin Narwade ★ 1.3k
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1.1k
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Comment: Comment: Cannot convert the inetgarted seurat object to the cds for monocle 3
7 months ago by Nitin Narwade ★ 1.3k
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1
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1.1k
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Comment: Comment: Cannot convert the inetgarted seurat object to the cds for monocle 3
7 months ago by Nitin Narwade ★ 1.3k
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1
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1.0k
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Comment: Comment: loom file for rna velocity
8 months ago by Nitin Narwade ★ 1.3k
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1.0k
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Answer: Answer: loom file for rna velocity
8 months ago by Nitin Narwade ★ 1.3k
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530
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Comment: Comment: calculateQCMetrics defunct, how to calculate the quality metrics by perCellQCMet
10 months ago by Nitin Narwade ★ 1.3k
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430
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Comment: Comment: How do I resolve an integration error in Seurat?
10 months ago by Nitin Narwade ★ 1.3k
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540
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Comment: Comment: Can we use 'SCT normalization' to find anchors and 'LogNormalize' for the integr
14 months ago by Nitin Narwade ★ 1.3k
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1
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832
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Comment: Comment: Difference between number of cells predicted by two different versions of cellra
14 months ago by Nitin Narwade ★ 1.3k
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2
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540
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Can we use 'SCT normalization' to find anchors and 'LogNormalize' for the integration?
batch effect sample-specific scRNA-Seq Seurat
14 months ago by Nitin Narwade ★ 1.3k
6
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4
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832
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Difference between number of cells predicted by two different versions of cellranger
Cellranger scRNA-Seq
updated 14 months ago by ★ 14k • written 14 months ago by ★ 1.3k
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713
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Answer: Answer: series matrix file or RAW file? which one in better
16 months ago by Nitin Narwade ★ 1.3k
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3.1k
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Comment: Comment: HOMER findMotifsGenome.pl to get the location of the motifs
17 months ago by Nitin Narwade ★ 1.3k
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1.7k
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Comment: Comment: Is it possible to predict functional profile of microbiome through 16S rRNA gene
18 months ago by Nitin Narwade ★ 1.3k
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10
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62k
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9 follow
Tutorial: Installing an updated R version (>=4.0) using conda
software-error R
updated 11 weeks ago by 39k • written 2.2 years ago by ★ 1.3k
5
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1
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1.7k
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Answer: Answer: Is it possible to predict functional profile of microbiome through 16S rRNA gene
18 months ago by Nitin Narwade ★ 1.3k
1
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0
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1.9k
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Comment: Comment: Searching expression for one particular gene in Seurat object issue (Seurat, R)
20 months ago by Nitin Narwade ★ 1.3k
1
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408
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Comment: Comment: read count to gene
20 months ago by Nitin Narwade ★ 1.3k
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1
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1.9k
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Comment: Comment: Searching expression for one particular gene in Seurat object issue (Seurat, R)
20 months ago by Nitin Narwade ★ 1.3k
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1
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496
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Comment: Comment: Iterate and extract data franes
20 months ago by Nitin Narwade ★ 1.3k
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1
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1.8k
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Comment: Comment: Survival analysis with survminer package in R: change number of decimal places i
21 months ago by Nitin Narwade ★ 1.3k
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1
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822
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Comment: Comment: Get matrix, barcodes and features from H5 file
21 months ago by Nitin Narwade ★ 1.3k
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0
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1.6k
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Comment: Comment: How to logo-plot sequences of uneven length ?
21 months ago by Nitin Narwade ★ 1.3k
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1
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1.6k
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Comment: Comment: How to logo-plot sequences of uneven length ?
21 months ago by Nitin Narwade ★ 1.3k
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0
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1.1k
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Comment: Comment: Coverage plot/histogram of a complete genome
21 months ago by Nitin Narwade ★ 1.3k
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1
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1.8k
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Comment: Comment: How to perform gene annotation in kallisto?
21 months ago by Nitin Narwade ★ 1.3k
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1
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1.8k
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Comment: Comment: How to perform gene annotation in kallisto?
21 months ago by Nitin Narwade ★ 1.3k
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1
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612
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Comment: Comment: How to taxonomically subsample a proteomes file ?
21 months ago by Nitin Narwade ★ 1.3k
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1
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1.8k
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Comment: Comment: How to perform gene annotation in kallisto?
21 months ago by Nitin Narwade ★ 1.3k
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1
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1.2k
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Comment: Comment: parsing gbk files (antismash result)
21 months ago by Nitin Narwade ★ 1.3k
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1
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1.7k
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Comment: Comment: Looking tools for genes annotation
21 months ago by Nitin Narwade ★ 1.3k
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1.5k
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Comment: Comment: Change chromosome notation in dbSNP VCF file
21 months ago by Nitin Narwade ★ 1.3k
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0
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421
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Comment: Comment: R FAMD listing all contributions
21 months ago by Nitin Narwade ★ 1.3k
1
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1
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1.5k
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Comment: Comment: Change chromosome notation in dbSNP VCF file
21 months ago by Nitin Narwade ★ 1.3k
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1
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574
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Comment: Comment: regarding gene expression data of GDAC Firehouse database
21 months ago by Nitin Narwade ★ 1.3k
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1
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1.6k
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Comment: Comment: How to colour points in cnetplot of clustprofiler?
21 months ago by Nitin Narwade ★ 1.3k
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1
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1.3k
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Comment: Comment: From EC terms to GO terms to GO enrichment
21 months ago by Nitin Narwade ★ 1.3k
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0
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1.3k
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Comment: Comment: antiSMASH output
21 months ago by Nitin Narwade ★ 1.3k
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0
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1.3k
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Comment: Comment: Survival Analysis Cut-off
21 months ago by Nitin Narwade ★ 1.3k
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1
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1.3k
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Comment: Comment: From EC terms to GO terms to GO enrichment
21 months ago by Nitin Narwade ★ 1.3k
0
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1
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1.3k
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Comment: Comment: From EC terms to GO terms to GO enrichment
21 months ago by Nitin Narwade ★ 1.3k
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1
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816
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Comment: Comment: Best match Blast
21 months ago by Nitin Narwade ★ 1.3k
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0
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2.3k
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Comment: Comment: Export normalized matrix Scanpy
21 months ago by Nitin Narwade ★ 1.3k
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1
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816
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Comment: Comment: Best match Blast
updated 21 months ago by 39k • written 21 months ago by ★ 1.3k
1
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1
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631
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Comment: Comment: How to find the number of copies of genes (e.g. 23S rRNA) present in a genome?
21 months ago by Nitin Narwade ★ 1.3k
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0
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414
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Comment: Comment: Filter peaks based on coverage
22 months ago by Nitin Narwade ★ 1.3k
1
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1
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661
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Comment: Comment: Is there an online server to get a great phylogenetic tree?
22 months ago by Nitin Narwade ★ 1.3k
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1
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696
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Answer: Answer: Best way to evaluate the relationship between protein and RNA abundance
22 months ago by Nitin Narwade ★ 1.3k
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1
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1.1k
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Comment: Comment: Extract subject sequences from Blast result
22 months ago by Nitin Narwade ★ 1.3k
3
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1
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1.1k
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Answer: Answer: Extract subject sequences from Blast result
22 months ago by Nitin Narwade ★ 1.3k
225 results • Page 1 of 5
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