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3
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1.9k
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Answer: A: topGO GO enrichment analysis for common DEGs from multiple pairwise comparisons
3.7 years ago by antonioggsousa 3.2k
2
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1
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6.3k
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Answer: A: Removing samples from phyloseq otu_table
3.7 years ago by antonioggsousa 3.2k
3
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1
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4.8k
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Answer: A: RNA-Seq Data Quality Assesment- Heatmap and PCA Interpretation
3.7 years ago by antonioggsousa 3.2k
0
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1
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3.2k
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Answer: A: Integrating TPM and raw count Seurat objects
3.7 years ago by antonioggsousa 3.2k
1
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0
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6.4k
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Answer: A: Seurat DefaultAssay integrated vs RNA
3.7 years ago by antonioggsousa 3.2k
13
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1
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23k
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Answer: A: How to Make Dot Plots of GO Terms?
3.8 years ago by antonioggsousa 3.2k
1
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0
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1.5k
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Answer: A: How to include samples names in assignTaxonomy of DADA2
3.8 years ago by antonioggsousa 3.2k
0
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0
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2.1k
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Answer: A: Python script for ATGC count
3.8 years ago by antonioggsousa 3.2k
1
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0
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11k
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Answer: C: Run Fastqc from terminal
3.8 years ago by antonioggsousa 3.2k
1
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1
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3.1k
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Answer: A: Warning messages: gene set enrichment analysis with clusterProfiler
3.8 years ago by antonioggsousa 3.2k
2
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0
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1.8k
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Answer: A: How I produce such a plot in R
3.8 years ago by antonioggsousa 3.2k
0
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2
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878
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Answer: A: Translate nucleotide sequence into AA sequence before BLAST?
3.8 years ago by antonioggsousa 3.2k
0
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0
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926
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Answer: A: Understanding the textual output file of FastQC - Per Base N Content
3.8 years ago by antonioggsousa 3.2k
2
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2
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6.6k
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Answer: A: How can I remove the outliers from a boxplot and fill the groups?
3.8 years ago by antonioggsousa 3.2k
0
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1
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1.9k
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Answer: A: Can I use pseudocounts for differential abundance of OTUs?
3.8 years ago by antonioggsousa 3.2k
1
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1
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2.6k
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Answer: A: How to extract out specific distances from a distance matrix?
3.8 years ago by antonioggsousa 3.2k
3
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0
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20k
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Answer: A: mitochondrial/ribosomal protein genes in scRNA-seq analysis
3.8 years ago by antonioggsousa 3.2k
3
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1
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1.6k
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Answer: A: looping through PE files ?
3.8 years ago by antonioggsousa 3.2k
1
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0
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5.4k
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Answer: A: How to extract to columns from a phyloseq sample_data object?
3.8 years ago by antonioggsousa 3.2k
0
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0
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1.1k
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Answer: A: Is there a tool for creating publication quallity phylogenetic tree with metadat
3.8 years ago by antonioggsousa 3.2k
1
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1
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2.2k
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Answer: A: DESeq2 of log2(count+1) transformed TCGA htseq counts from Xenabrowser
3.8 years ago by antonioggsousa 3.2k
1
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2
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6.2k
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Answer: A: METAPHLAN: Relative abundance to read count
3.8 years ago by antonioggsousa 3.2k
0
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1
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1.3k
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Answer: A: Extract out lines with 's__' into a new file together with first two lines of th
3.8 years ago by antonioggsousa 3.2k
2
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0
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2.4k
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Answer: A: ClusterProfiler: enrichDGN failing to map gene ID
3.8 years ago by antonioggsousa 3.2k
1
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0
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2.9k
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Answer: A: How to convert merged_abundance-table into a biom file?
3.8 years ago by antonioggsousa 3.2k
0
votes
1
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896
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Answer: A: which software or tool can be used for identifying alternative splicing events b
3.8 years ago by antonioggsousa 3.2k
1
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1
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2.0k
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Answer: A: Density vs gene count plot
3.8 years ago by antonioggsousa 3.2k
1
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0
replies
3.9k
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Answer: A: How do I use bash loop to map with Salmon on files in multiple folders
3.9 years ago by antonioggsousa 3.2k
0
votes
0
replies
980
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Answer: A: draw consensus clustering heatmap
3.9 years ago by antonioggsousa 3.2k
1
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1
reply
1.6k
views
Answer: A: Softwares for statistitical analysis of MetaPhlAn output
3.9 years ago by antonioggsousa 3.2k
1
vote
1
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725
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Answer: C: heatmap in R
3.9 years ago by antonioggsousa 3.2k
4
votes
1
reply
7.0k
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Answer: A: Getting mitochondrial genes for scRNAseq
3.9 years ago by antonioggsousa 3.2k
3
votes
2
replies
3.3k
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Answer: A: Convert Logp value to P value
updated 3.9 years ago by 43k • written 3.9 years ago by 3.2k
0
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0
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530
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Answer: A: Grouping gene names programmatically
3.9 years ago by antonioggsousa 3.2k
2
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1
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1.6k
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Answer: A: Pairwise wilcox test error
3.9 years ago by antonioggsousa 3.2k
2
votes
1
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3.6k
views
Answer: A: How to generate dotplot for gene expression data differential gene expression an
updated 3.9 years ago by 142k • written 3.9 years ago by 3.2k
0
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0
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1.8k
views
Answer: A: Relative abundance heatmap interpretation
3.9 years ago by antonioggsousa 3.2k
1
vote
1
reply
1.1k
views
Answer: C: IsoEM2 installation: permission denied problem
3.9 years ago by antonioggsousa 3.2k
3
votes
1
reply
5.0k
views
Answer: A: Classic threshold for log2 fold change in RNA-seq experiment
updated 3.9 years ago by 35k • written 3.9 years ago by 3.2k
1
vote
1
reply
17k
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Answer: A: Re-arrange conditions in Seurat
3.9 years ago by antonioggsousa 3.2k
0
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0
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1.0k
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Answer: A: Interaction Factors Removing All Variability
3.9 years ago by antonioggsousa 3.2k
2
votes
0
replies
1.2k
views
Answer: A: Finding the centromere and telomere of cattle genome (Bos Taurus)
3.9 years ago by antonioggsousa 3.2k
2
votes
0
replies
2.9k
views
Answer: A: Get Gene Ontology ID from gene symbol using R
3.9 years ago by antonioggsousa 3.2k
0
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0
replies
2.5k
views
Answer: A: filter OTU table based on absolute abundance
3.9 years ago by antonioggsousa 3.2k
1
vote
0
replies
2.5k
views
Answer: A: stacked barplot color choice
3.9 years ago by antonioggsousa 3.2k
1
vote
1
reply
65k
views
Answer: C: pheatmap: Error in hclust(d, method = method) : NA/NaN/Inf in foreign function
3.9 years ago by antonioggsousa 3.2k
3
votes
0
replies
1.4k
views
Answer: A: Odd DESeq2 results
3.9 years ago by antonioggsousa 3.2k
7
votes
1
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925
views
Answer: A: How to extract a protein sequence?
3.9 years ago by antonioggsousa 3.2k
1
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0
replies
3.2k
views
Answer: A: select() not working in R
4.6 years ago by antonioggsousa 3.2k
2
votes
1
reply
3.4k
views
Answer: A: metagenomics- read based diversity analysis
4.6 years ago by antonioggsousa 3.2k
101 results • Page 2 of 3
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