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3
votes
5
replies
2.2k
views
Snakemake + singularity fails to locate bwa index files.
singularity snakemake bwa
updated 3.2 years ago by 23k • written 3.2 years ago by ▴ 230
0
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0
replies
3.7k
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Comment: Comment: Read coverage shows a difference in IGV
3.2 years ago by jkim ▴ 230
0
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0
replies
3.7k
views
Comment: Comment: Read coverage shows a difference in IGV
3.2 years ago by jkim ▴ 230
0
votes
0
replies
3.7k
views
Comment: Comment: Read coverage shows a difference in IGV
3.2 years ago by jkim ▴ 230
0
votes
0
replies
3.7k
views
Comment: Comment: Read coverage shows a difference in IGV
3.2 years ago by jkim ▴ 230
3
votes
7
replies
3.7k
views
Read coverage shows a difference in IGV
coverage BAM
3.2 years ago by jkim ▴ 230
0
votes
0
replies
7.7k
views
Comment: Comment: Is there a limit for SAMTOOLS tview option?
3.2 years ago by jkim ▴ 230
0
votes
0
replies
2.8k
views
Comment: Comment: Filter out reads with hidden tags in bam files
3.2 years ago by jkim ▴ 230
0
votes
0
replies
2.8k
views
Comment: Comment: Filter out reads with hidden tags in bam files
3.2 years ago by jkim ▴ 230
0
votes
0
replies
2.8k
views
Comment: Comment: Filter out reads with hidden tags in bam files
3.2 years ago by jkim ▴ 230
4
votes
7
replies
2.8k
views
Filter out reads with hidden tags in bam files
BAM samtools
3.2 years ago by jkim ▴ 230
0
votes
1
reply
2.8k
views
Answer: Answer: Filter out reads with hidden tags in bam files
3.2 years ago by jkim ▴ 230
0
votes
0
replies
1.8k
views
Answer: Answer: Counts from STAR with stranded protocol
3.5 years ago by jkim ▴ 230
0
votes
1
reply
2.8k
views
Comment: Comment: snakemake workflow
3.5 years ago by jkim ▴ 230
0
votes
0
replies
3.2k
views
Comment: Comment: Biopython first project help
3.6 years ago by jkim ▴ 230
0
votes
1
reply
3.2k
views
Comment: Comment: Biopython first project help
3.6 years ago by jkim ▴ 230
0
votes
1
reply
3.7k
views
Comment: Comment: BLASTn produces empty output + output is 'Killed'
3.8 years ago by jkim ▴ 230
1
vote
0
replies
3.0k
views
Comment: Comment: How to rename multiple files?
3.8 years ago by jkim ▴ 230
0
votes
0
replies
1.5k
views
Answer: Answer: Rename fasta file based on coordinates
3.8 years ago by jkim ▴ 230
0
votes
1
reply
1.5k
views
Comment: Comment: Sickle is giving empty trimmed file
3.8 years ago by jkim ▴ 230
0
votes
0
replies
5.5k
views
Answer: Answer: Fastest way to parse through a fasta file in python
3.8 years ago by jkim ▴ 230
2
votes
0
replies
5.4k
views
Answer: Answer: How to convert FASTQ to FASTA
3.9 years ago by jkim ▴ 230
2
votes
0
replies
1.6k
views
Answer: Answer: Basename the contents of a file
3.9 years ago by jkim ▴ 230
0
votes
0
replies
6.8k
views
Comment: Comment: Differential Gene Expression
4.2 years ago by jkim ▴ 230
0
votes
1
reply
6.8k
views
Comment: Comment: Differential Gene Expression
4.2 years ago by jkim ▴ 230
0
votes
1
reply
1.3k
views
Comment: Comment: DEGs with uninsteresed sample files
4.2 years ago by jkim ▴ 230
3
votes
3
replies
1.3k
views
DEGs with uninsteresed sample files
design bulkRNAseq DEG matrix
updated 4.2 years ago by 15k • written 4.2 years ago by ▴ 230
0
votes
0
replies
2.4k
views
Comment: C: Snakemake (MissingOutputException) doesn't seem to find output files.
4.7 years ago by jkim ▴ 230
2
votes
2
replies
2.4k
views
Snakemake (MissingOutputException) doesn't seem to find output files.
Snakemake
4.7 years ago by jkim ▴ 230
1
vote
5
replies
3.7k
views
Retrieve all compound ID, Description from a ko ID
KEGG REST API
updated 6.5 years ago by ★ 2.2k • written 6.9 years ago by ▴ 230
0
votes
1
reply
3.7k
views
Comment: C: Retrieve all compound ID, Description from a ko ID
6.9 years ago by jkim ▴ 230
0
votes
0
replies
3.7k
views
Comment: C: Retrieve all compound ID, Description from a ko ID
6.9 years ago by jkim ▴ 230
1
vote
2
replies
5.0k
views
Answer: A: featureCounts and bash
updated 7.3 years ago by 16k • written 7.3 years ago by ▴ 230
1
vote
0
replies
7.8k
views
Answer: A: HISAT2 for loop shell scripting
7.6 years ago by jkim ▴ 230
0
votes
0
replies
6.5k
views
Comment: C: Building RNAseq pipeline STAR-RSEM-tximport-DESeq2
7.8 years ago by jkim ▴ 230
6
votes
3
replies
6.5k
views
Building RNAseq pipeline STAR-RSEM-tximport-DESeq2
RNA-Seq pipeline
updated 7.8 years ago by ★ 3.7k • written 7.8 years ago by ▴ 230
86 results • Page 2 of 2
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