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Answer: Answer: Changing LFC font size on Complex Heatmap
6 months ago by bk11 ★ 2.4k
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679
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Answer: Answer: pheatmap
7 months ago by bk11 ★ 2.4k
3
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502
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Answer: Answer: Feature plot not applicable for RunTSNE object in seurat?
7 months ago by bk11 ★ 2.4k
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807
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Answer: Answer: Exporting DEGs obtained from DESeq2
7 months ago by bk11 ★ 2.4k
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589
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Answer: Answer: GOSt Plot
7 months ago by bk11 ★ 2.4k
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1.3k
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Answer: Answer: Help with error running velocyto
7 months ago by bk11 ★ 2.4k
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1.1k
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Answer: Answer: Search RCSB with a list of protein names?
7 months ago by bk11 ★ 2.4k
2
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542
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Answer: Answer: Imputation server failing to see samples in VCF files
7 months ago by bk11 ★ 2.4k
3
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1.4k
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Answer: Answer: How to convert data in r?
updated 7 months ago by 43k • written 7 months ago by ★ 2.4k
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1.8k
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Answer: Answer: Converting hdf5 file to loom file
7 months ago by bk11 ★ 2.4k
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1.9k
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Answer: Answer: How to plot proportion of cells in each cluster with scanpy?
7 months ago by bk11 ★ 2.4k
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936
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Answer: Answer: Violin plot (Monocle 3) - Troubleshooting
updated 7 months ago by 43k • written 7 months ago by ★ 2.4k
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519
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Answer: Answer: miRDeep2 - identifying miRNAs from deep sequencing data
7 months ago by bk11 ★ 2.4k
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1
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935
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Answer: Answer: How to display all top markers in the heatmap by DoHeatmap (Seurat) when there a
updated 7 months ago by 43k • written 7 months ago by ★ 2.4k
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1.5k
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Answer: Answer: Inflated GWAS test statistic after merging multiple batches of genotype dataset
7 months ago by bk11 ★ 2.4k
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1.1k
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Answer: Answer: differential gene expression analysis comparing different conditions using scRNA
7 months ago by bk11 ★ 2.4k
3
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415
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Answer: Answer: Automatic Cluster Annotation to the subsets of immune cells
7 months ago by bk11 ★ 2.4k
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724
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Answer: Answer: Data Import Issue detectRUNS R
7 months ago by bk11 ★ 2.4k
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789
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Answer: Answer: GTF annotation file for Hg38 Dec 2013 (First Release)
7 months ago by bk11 ★ 2.4k
2
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1
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455
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Answer: Answer: How to split grouping information in a single expression matrix?
7 months ago by bk11 ★ 2.4k
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1
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819
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Answer: Answer: Running Enrichr in python using a background gene list
7 months ago by bk11 ★ 2.4k
2
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3.2k
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Answer: Answer: Running python script in slurm using conda environment
7 months ago by bk11 ★ 2.4k
2
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529
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Answer: Answer: how to remove description from header?
7 months ago by bk11 ★ 2.4k
1
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0
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877
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Answer: Answer: summarize consecutive columns over a data frame
updated 7 months ago by 43k • written 7 months ago by ★ 2.4k
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492
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Answer: Answer: Choosing background for ORA using scrnaseq
7 months ago by bk11 ★ 2.4k
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626
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Answer: Answer: Michigan Imputation Server low reference overlap
7 months ago by bk11 ★ 2.4k
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1
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1.2k
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Answer: Answer: Is there a way to get a list of all homogygous sites for each sample with plink
8 months ago by bk11 ★ 2.4k
2
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0
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621
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Answer: Answer: Consensus Cluster takes normalized gene counts or raw gene counts?
8 months ago by bk11 ★ 2.4k
3
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1.0k
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Answer: Answer: Could not view/find meta.data and Error merging three seurat object
8 months ago by bk11 ★ 2.4k
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1.9k
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Answer: Answer: How to limit fasta header to 40 characters?
8 months ago by bk11 ★ 2.4k
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0
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676
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Answer: Answer: GO annotation in R using library(org.Hs.eg.db)
8 months ago by bk11 ★ 2.4k
2
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1
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1.9k
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Answer: Answer: How to limit fasta header to 40 characters?
8 months ago by bk11 ★ 2.4k
2
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0
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617
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Answer: Answer: About scdbfinder
8 months ago by bk11 ★ 2.4k
4
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1
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665
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Answer: Answer: How to calculate GC content of reads that mapped to a specific gene?
8 months ago by bk11 ★ 2.4k
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1
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1.2k
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Answer: Answer: R based query about making pairwise matrix
8 months ago by bk11 ★ 2.4k
2
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2
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1.6k
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Answer: Answer: Help with Error: Required version of NumPy not available: installation of Numpy
8 months ago by bk11 ★ 2.4k
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1
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1.3k
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Answer: Answer: CellRanger output more cells than specified using --force-cells? Why?
8 months ago by bk11 ★ 2.4k
0
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1
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1.6k
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Answer: Answer: Negative Expression in RNA Assay on Dot Plot After SCT Transform
8 months ago by bk11 ★ 2.4k
0
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0
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431
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Answer: Answer: Checking a SNP as common SNP or not using UCSC genome browser
8 months ago by bk11 ★ 2.4k
1
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0
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331
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Answer: Answer: tfea.chip mouse server
8 months ago by bk11 ★ 2.4k
2
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1
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876
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Answer: Answer: Integration in single cell RNAseq: What does it mean?
8 months ago by bk11 ★ 2.4k
0
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1
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915
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Answer: Answer: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
8 months ago by bk11 ★ 2.4k
2
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1
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667
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Answer: Answer: Help with error using ClosetFeature() in Signac
8 months ago by bk11 ★ 2.4k
1
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1
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548
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Answer: Answer: Non-coding DNA structure prediction recomendation
8 months ago by bk11 ★ 2.4k
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1.0k
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Answer: Answer: How to construct an adjacency matrix based on output of nearest neighbors sear
8 months ago by bk11 ★ 2.4k
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0
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753
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Answer: Answer: How to Add Mutations to the sequence
8 months ago by bk11 ★ 2.4k
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0
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1.2k
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Answer: Answer: Identifying transcription factors for a list of genes
updated 7 months ago by 43k • written 8 months ago by ★ 2.4k
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1
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578
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Answer: Answer: Trouble with breseq Bam2Cov
8 months ago by bk11 ★ 2.4k
0
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1
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852
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Answer: Answer: A cluster expresses two types of cells' markers in scRNA-seq
8 months ago by bk11 ★ 2.4k
0
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1
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631
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Answer: Answer: Heatmap ChIP-seq average signal
8 months ago by bk11 ★ 2.4k
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