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Answer: Answer: Microarray DGE analysis
8 months ago by bk11 ★ 2.4k
2
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643
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Answer: Answer: heatmap() in r assigning incorrect scale color to only first column values
8 months ago by bk11 ★ 2.4k
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1
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978
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Answer: Answer: Can I using scVI to integrate data, then using R to conduct following analysis?
8 months ago by bk11 ★ 2.4k
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1.2k
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Answer: Answer: What is an appropriate cut off for p-values and log fold changes during the anal
8 months ago by bk11 ★ 2.4k
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738
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Answer: Answer: Recapitulating a GenomeBrowser-style plot
8 months ago by bk11 ★ 2.4k
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0
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580
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Answer: Answer: Do I need to perform basic filtering before using scrublet?
8 months ago by bk11 ★ 2.4k
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1.4k
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Answer: Answer: PCA proteomic DEP
8 months ago by bk11 ★ 2.4k
2
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2
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1.3k
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Answer: Answer: Help with Error: None of the requested features were found: PECAM1 in slot data
updated 8 months ago by 43k • written 8 months ago by ★ 2.4k
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0
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397
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Answer: Answer: Data integration in scRNAseq
updated 8 months ago by 43k • written 8 months ago by ★ 2.4k
2
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1
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543
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Answer: Answer: How to choose the number of cluster in single cell multiome (RNA & ATAC)
8 months ago by bk11 ★ 2.4k
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656
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Answer: Answer: Multiple RNA-seq fastq files for one sample in GEO database
8 months ago by bk11 ★ 2.4k
4
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0
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677
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Answer: Answer: Bulk and Single cell TCRSeq analysis
8 months ago by bk11 ★ 2.4k
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1.2k
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Answer: Answer: Error in openning FastQC
8 months ago by bk11 ★ 2.4k
2
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1
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700
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Answer: Answer: command to extract SRA fastq data summary
8 months ago by bk11 ★ 2.4k
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2.1k
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Answer: Answer: Heatmap legend position change
8 months ago by bk11 ★ 2.4k
3
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0
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1.3k
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Answer: Answer: Enricher - Hyper Geometric Test Details
8 months ago by bk11 ★ 2.4k
1
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0
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824
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Answer: Answer: How to loop over certain files within a directory that belongs to certain sample
8 months ago by bk11 ★ 2.4k
1
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2
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718
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Answer: Answer: simulation
8 months ago by bk11 ★ 2.4k
0
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1
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985
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Answer: Answer: How to choose threshold for scrublet?
8 months ago by bk11 ★ 2.4k
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0
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459
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Answer: Answer: How to remove the rownames in heatmap generated plot?
8 months ago by bk11 ★ 2.4k
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1.0k
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Answer: Answer: How to display gene expression after Harmony correction in scRNA-seq analysis
8 months ago by bk11 ★ 2.4k
2
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0
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420
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Answer: Answer: Integrate proteomics and scRNA-seq datasets
8 months ago by bk11 ★ 2.4k
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1
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793
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Answer: Answer: bcftoold guess ploidy
8 months ago by bk11 ★ 2.4k
2
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1
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735
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Answer: Answer: order of legend in ggscatter
8 months ago by bk11 ★ 2.4k
1
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1
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692
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Answer: Answer: Chip-Seq and DeepTools
updated 8 months ago by 43k • written 8 months ago by ★ 2.4k
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0
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670
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Answer: Answer: How can I figure out where a mouse (C57BL/6J) genome is heterozygous?
8 months ago by bk11 ★ 2.4k
1
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0
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997
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Answer: Answer: How to get normalised counts corrected for variables in the design matrix of DES
8 months ago by bk11 ★ 2.4k
1
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1
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780
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Answer: Answer: Connecting to Web... problem in plink?
8 months ago by bk11 ★ 2.4k
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1
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735
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Answer: Answer: feature.tsv from scRNA-seq dataset has gene name with dash number suffix followi
8 months ago by bk11 ★ 2.4k
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0
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1.0k
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Answer: Answer: TSNE plot dots that are close together assigned to different clusters.
8 months ago by bk11 ★ 2.4k
1
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0
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533
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Answer: Answer: Differential gene expression with specif genes of interest
8 months ago by bk11 ★ 2.4k
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0
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1.1k
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Answer: Answer: Performing differential expression analysis after applying transformations on my
8 months ago by bk11 ★ 2.4k
2
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1
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840
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Answer: Answer: is it correct to normalize batch corrected data?
8 months ago by bk11 ★ 2.4k
4
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0
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707
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Answer: Answer: Heatmap in R; how to change the order of Row names
updated 8 months ago by 43k • written 8 months ago by ★ 2.4k
1
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1
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921
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Answer: Answer: Heatmap Annotation in R
8 months ago by bk11 ★ 2.4k
0
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0
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486
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Answer: Answer: Question with manipulating OD gene list when running PCA
8 months ago by bk11 ★ 2.4k
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1
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539
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Answer: Answer: I have a FASTA file. I want to extract from some sequence using seqtk. What shou
8 months ago by bk11 ★ 2.4k
1
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1
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929
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Answer: Answer: Microarray - multiple probe-ids matching to the same gene symbol but different e
9 months ago by bk11 ★ 2.4k
0
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1
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765
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Answer: Answer: how to chage scaffold number
9 months ago by bk11 ★ 2.4k
0
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1
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952
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Answer: Answer: matching gnomAD allele frequency
9 months ago by bk11 ★ 2.4k
2
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1
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946
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Answer: Answer: Can I aggregate visium data from different samples using harmony?
9 months ago by bk11 ★ 2.4k
2
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1
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661
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Answer: Answer: ComplexHeatmap with anno_barplot
9 months ago by bk11 ★ 2.4k
0
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1
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858
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Answer: Answer: Why FindMarkers between conditions shows pct.1 and pct.2 as 1 for most of the ge
10 months ago by bk11 ★ 2.4k
0
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0
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3.6k
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Answer: A: Extracting accession number from header using sed
updated 6.7 years ago by 142k • written 6.7 years ago by ★ 2.4k
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1
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1.9k
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Answer: A: How to know which reads were not aligned to a reference genome?
6.7 years ago by bk11 ★ 2.4k
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