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3
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Answer: Answer: Convert a BAM from GRCh37 to hg19?
22 months ago by Joel Wallenius ▴ 210
0
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1
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1.9k
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Comment: Comment: Convert a BAM from GRCh37 to hg19?
22 months ago by Joel Wallenius ▴ 210
0
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0
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350
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STR expansion detection on IonTorrent WES data?
repeat STR IonTorrent wes ngs short tandem
23 months ago by Joel Wallenius ▴ 210
0
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0
replies
369
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"Best" freewares for linkage analyses?
Equilibrium Linkage Disequilibrum haplotyping
23 months ago by Joel Wallenius ▴ 210
0
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0
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1.4k
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Comment: Comment: Bam file to Sanger-like chromatogram?
2.2 years ago by Joel Wallenius ▴ 210
0
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0
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1.4k
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Comment: Comment: Bam file to Sanger-like chromatogram?
2.2 years ago by Joel Wallenius ▴ 210
0
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0
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3.7k
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Comment: Comment: Are there any GenomeStudio alternatives to process Illumina genotyping array?
2.2 years ago by Joel Wallenius ▴ 210
0
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0
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3.7k
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Comment: Comment: Are there any GenomeStudio alternatives to process Illumina genotyping array?
2.2 years ago by Joel Wallenius ▴ 210
0
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2
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1.4k
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Comment: Comment: Bam file to Sanger-like chromatogram?
2.2 years ago by Joel Wallenius ▴ 210
0
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1
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1.4k
views
Comment: Comment: Bam file to Sanger-like chromatogram?
2.2 years ago by Joel Wallenius ▴ 210
0
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0
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1.4k
views
Comment: Comment: Bam file to Sanger-like chromatogram?
2.2 years ago by Joel Wallenius ▴ 210
4
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11
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1.4k
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Bam file to Sanger-like chromatogram?
sanger visualization diagram plot bam
2.2 years ago by Joel Wallenius ▴ 210
0
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0
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1.2k
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Comment: Comment: RC an entire bam file?
2.2 years ago by Joel Wallenius ▴ 210
0
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0
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1.2k
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Comment: Comment: RC an entire bam file?
2.2 years ago by Joel Wallenius ▴ 210
0
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1
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1.2k
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Comment: Comment: RC an entire bam file?
2.2 years ago by Joel Wallenius ▴ 210
0
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0
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2.3k
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Comment: Comment: Mate pairs and paired reads confusion
2.2 years ago by Joel Wallenius ▴ 210
3
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9
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1.2k
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RC an entire bam file?
sam genome complement viewer alignment bam Reverse
2.2 years ago by Joel Wallenius ▴ 210
0
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1
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1.2k
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Comment: Comment: RC an entire bam file?
2.2 years ago by Joel Wallenius ▴ 210
1
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0
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2.3k
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Comment: Comment: Mate pairs and paired reads confusion
2.2 years ago by Joel Wallenius ▴ 210
0
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2
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2.3k
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Comment: Comment: Mate pairs and paired reads confusion
2.2 years ago by Joel Wallenius ▴ 210
0
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1
reply
2.3k
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Comment: Comment: Mate pairs and paired reads confusion
2.2 years ago by Joel Wallenius ▴ 210
3
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10
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2.3k
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Mate pairs and paired reads confusion
sequencing
2.2 years ago by Joel Wallenius ▴ 210
0
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0
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420
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Alternatives to ExpansionHunter?
Repeat STR Expansion Genetics Repeats
2.2 years ago by Joel Wallenius ▴ 210
0
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0
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1.8k
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Comment: Comment: GATK's GenomicsDBImport takes forever...
2.7 years ago by Joel Wallenius ▴ 210
0
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1
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1.8k
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Comment: Comment: GATK's GenomicsDBImport takes forever...
2.7 years ago by Joel Wallenius ▴ 210
2
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4
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1.8k
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GATK's GenomicsDBImport takes forever...
Variant GATK Calling
2.7 years ago by Joel Wallenius ▴ 210
0
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0
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1.3k
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Comment: C: Best alignment software for mapping short DNA reads to transcriptome?
4.3 years ago by Joel Wallenius ▴ 210
0
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1
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1.3k
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Comment: C: Best alignment software for mapping short DNA reads to transcriptome?
4.3 years ago by Joel Wallenius ▴ 210
0
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1
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1.3k
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Comment: C: Best alignment software for mapping short DNA reads to transcriptome?
4.3 years ago by Joel Wallenius ▴ 210
0
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1
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1.3k
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Comment: C: Best alignment software for mapping short DNA reads to transcriptome?
4.3 years ago by Joel Wallenius ▴ 210
0
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8
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1.3k
views
Best alignment software for mapping short DNA reads to transcriptome?
alignment Transcriptome DNA
4.3 years ago by Joel Wallenius ▴ 210
2
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1
reply
3.3k
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Comment: C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by Joel Wallenius ▴ 210
1
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0
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3.3k
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Comment: C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by Joel Wallenius ▴ 210
0
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1
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3.3k
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Comment: C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by Joel Wallenius ▴ 210
0
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1
reply
3.3k
views
Comment: C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by Joel Wallenius ▴ 210
1
vote
1
reply
3.3k
views
Comment: C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by Joel Wallenius ▴ 210
1
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1
reply
3.3k
views
Comment: C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by Joel Wallenius ▴ 210
0
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1
reply
3.3k
views
Comment: C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by Joel Wallenius ▴ 210
0
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1
reply
3.3k
views
Comment: C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by Joel Wallenius ▴ 210
0
votes
2
replies
3.3k
views
Comment: C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by Joel Wallenius ▴ 210
0
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1
reply
3.3k
views
Comment: C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by Joel Wallenius ▴ 210
0
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0
replies
3.3k
views
Comment: C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by Joel Wallenius ▴ 210
20
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26
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3.3k
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Is there a command line tool that can take an alignment fasta and input and outputs an image?
alignment fasta image
updated 9 months ago by 21k • written 4.9 years ago by ▴ 210
0
votes
0
replies
773
views
AnnoVar with custom genomes?
AnnoVar Annovar
4.9 years ago by Joel Wallenius ▴ 210
0
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9
replies
5.4k
views
Calculating FPKM and TPM by hand from htseq-count output?
RNA-Seq rna-seq htseq FPKM TPM
updated 9 months ago by 82k • written 5.1 years ago by ▴ 210
0
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0
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1.4k
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Comment: C: Where is the (hg19) reference data for transcript isoforms' relative abundances
5.0 years ago by Joel Wallenius ▴ 210
0
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1
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1.4k
views
Comment: C: Where is the (hg19) reference data for transcript isoforms' relative abundances
5.0 years ago by Joel Wallenius ▴ 210
0
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1
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1.4k
views
Comment: C: Where is the (hg19) reference data for transcript isoforms' relative abundances
5.0 years ago by Joel Wallenius ▴ 210
2
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7
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1.4k
views
Where is the (hg19) reference data for transcript isoforms' relative abundances for each gene?
RNA-Seq transcriptomics isoforms
updated 5.0 years ago by 19k • written 5.0 years ago by ▴ 210
0
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0
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5.4k
views
Comment: C: Calculating FPKM and TPM by hand from htseq-count output?
5.1 years ago by Joel Wallenius ▴ 210
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