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3
votes
2
replies
1.9k
views
Answer:
Answer: Convert a BAM from GRCh37 to hg19?
21 months ago by
Joel Wallenius
▴ 210
0
votes
1
reply
1.9k
views
Comment:
Comment: Convert a BAM from GRCh37 to hg19?
22 months ago by
Joel Wallenius
▴ 210
0
votes
0
replies
344
views
STR expansion detection on IonTorrent WES data?
repeat
STR
IonTorrent
wes
ngs
short
tandem
22 months ago by
Joel Wallenius
▴ 210
0
votes
0
replies
366
views
"Best" freewares for linkage analyses?
Equilibrium
Linkage
Disequilibrum
haplotyping
22 months ago by
Joel Wallenius
▴ 210
0
votes
0
replies
1.4k
views
Comment:
Comment: Bam file to Sanger-like chromatogram?
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
1.4k
views
Comment:
Comment: Bam file to Sanger-like chromatogram?
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
3.7k
views
Comment:
Comment: Are there any GenomeStudio alternatives to process Illumina genotyping array?
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
3.7k
views
Comment:
Comment: Are there any GenomeStudio alternatives to process Illumina genotyping array?
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
2
replies
1.4k
views
Comment:
Comment: Bam file to Sanger-like chromatogram?
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
1.4k
views
Comment:
Comment: Bam file to Sanger-like chromatogram?
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
1.4k
views
Comment:
Comment: Bam file to Sanger-like chromatogram?
2.1 years ago by
Joel Wallenius
▴ 210
4
votes
11
replies
1.4k
views
Bam file to Sanger-like chromatogram?
sanger
visualization
diagram
plot
bam
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
1.2k
views
Comment:
Comment: RC an entire bam file?
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
1.2k
views
Comment:
Comment: RC an entire bam file?
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
1.2k
views
Comment:
Comment: RC an entire bam file?
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
2.2k
views
Comment:
Comment: Mate pairs and paired reads confusion
2.1 years ago by
Joel Wallenius
▴ 210
3
votes
9
replies
1.2k
views
RC an entire bam file?
sam
genome
complement
viewer
alignment
bam
Reverse
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
1.2k
views
Comment:
Comment: RC an entire bam file?
2.1 years ago by
Joel Wallenius
▴ 210
1
vote
0
replies
2.2k
views
Comment:
Comment: Mate pairs and paired reads confusion
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
2
replies
2.2k
views
Comment:
Comment: Mate pairs and paired reads confusion
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
2.2k
views
Comment:
Comment: Mate pairs and paired reads confusion
2.1 years ago by
Joel Wallenius
▴ 210
3
votes
10
replies
2.2k
views
Mate pairs and paired reads confusion
sequencing
2.1 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
416
views
Alternatives to ExpansionHunter?
Repeat
STR
Expansion
Genetics
Repeats
2.2 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
1.7k
views
Comment:
Comment: GATK's GenomicsDBImport takes forever...
2.6 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
1.7k
views
Comment:
Comment: GATK's GenomicsDBImport takes forever...
2.6 years ago by
Joel Wallenius
▴ 210
2
votes
4
replies
1.7k
views
GATK's GenomicsDBImport takes forever...
Variant
GATK
Calling
2.6 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
1.3k
views
Comment:
C: Best alignment software for mapping short DNA reads to transcriptome?
4.3 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
1.3k
views
Comment:
C: Best alignment software for mapping short DNA reads to transcriptome?
4.3 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
1.3k
views
Comment:
C: Best alignment software for mapping short DNA reads to transcriptome?
4.3 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
1.3k
views
Comment:
C: Best alignment software for mapping short DNA reads to transcriptome?
4.3 years ago by
Joel Wallenius
▴ 210
0
votes
8
replies
1.3k
views
Best alignment software for mapping short DNA reads to transcriptome?
alignment
Transcriptome
DNA
4.3 years ago by
Joel Wallenius
▴ 210
2
votes
1
reply
3.2k
views
Comment:
C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by
Joel Wallenius
▴ 210
1
vote
0
replies
3.2k
views
Comment:
C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
3.2k
views
Comment:
C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
3.2k
views
Comment:
C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by
Joel Wallenius
▴ 210
1
vote
1
reply
3.2k
views
Comment:
C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by
Joel Wallenius
▴ 210
1
vote
1
reply
3.2k
views
Comment:
C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
3.2k
views
Comment:
C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
3.2k
views
Comment:
C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by
Joel Wallenius
▴ 210
0
votes
2
replies
3.2k
views
Comment:
C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
3.2k
views
Comment:
C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
3.2k
views
Comment:
C: Is there a command line tool that can take an alignment fasta and input and outp
4.9 years ago by
Joel Wallenius
▴ 210
20
votes
26
replies
3.2k
views
Is there a command line tool that can take an alignment fasta and input and outputs an image?
alignment
fasta
image
updated 9 months ago by
Joe
21k • written 4.9 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
765
views
AnnoVar with custom genomes?
AnnoVar
Annovar
4.9 years ago by
Joel Wallenius
▴ 210
0
votes
9
replies
5.4k
views
Calculating FPKM and TPM by hand from htseq-count output?
RNA-Seq
rna-seq
htseq
FPKM
TPM
updated 9 months ago by
ATpoint
82k • written 5.1 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
1.4k
views
Comment:
C: Where is the (hg19) reference data for transcript isoforms' relative abundances
5.0 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
1.4k
views
Comment:
C: Where is the (hg19) reference data for transcript isoforms' relative abundances
5.0 years ago by
Joel Wallenius
▴ 210
0
votes
1
reply
1.4k
views
Comment:
C: Where is the (hg19) reference data for transcript isoforms' relative abundances
5.0 years ago by
Joel Wallenius
▴ 210
2
votes
7
replies
1.4k
views
Where is the (hg19) reference data for transcript isoforms' relative abundances for each gene?
RNA-Seq
transcriptomics
isoforms
updated 5.0 years ago by
i.sudbery
19k • written 5.0 years ago by
Joel Wallenius
▴ 210
0
votes
0
replies
5.4k
views
Comment:
C: Calculating FPKM and TPM by hand from htseq-count output?
5.1 years ago by
Joel Wallenius
▴ 210
137 results • Page
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