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Comment: C: Empty output from MACS2 when using control
8.3 years ago by Sukhi Singh 11k
3
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1.4k
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Comment: C: Homer motif discorvery
8.3 years ago by Sukhi Singh 11k
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1
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7.0k
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Comment: C: Empty output from MACS2 when using control
8.3 years ago by Sukhi Singh 11k
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2.6k
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Comment: C: Subsetting data from BAM file using R tools
8.3 years ago by Sukhi Singh 11k
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7.2k
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Comment: C: How to blast against published transcriptome data
8.3 years ago by Sukhi Singh 11k
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1
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7.2k
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Answer: A: How to blast against published transcriptome data
8.3 years ago by Sukhi Singh 11k
3
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1.8k
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Answer: Answer: Program/Tool that can determine whether two profiles are likely to be from the s
updated 22 months ago by 43k • written 8.3 years ago by 11k
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2.5k
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Answer: A: options in fastq-dump
8.3 years ago by Sukhi Singh 11k
1
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1
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7.0k
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Answer: A: Empty output from MACS2 when using control
8.3 years ago by Sukhi Singh 11k
1
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0
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3.9k
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Answer: A: Data Download using TCGAbiolinks from TCGA database
8.3 years ago by Sukhi Singh 11k
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0
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2.5k
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Comment: C: GEO data retrieve and analyasis
8.3 years ago by Sukhi Singh 11k
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1
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2.4k
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Comment: C: filtering only differentially expressed genes
8.3 years ago by Sukhi Singh 11k
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1
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2.1k
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Comment: C: More file parsing :)
8.3 years ago by Sukhi Singh 11k
1
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1
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9.6k
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Comment: C: Why Vcftools Commands Not Working?
8.6 years ago by Sukhi Singh 11k
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5.0k
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Comment: Comment: How to know if samtools sort exited normally [left temporary files behind]
updated 20 months ago by 43k • written 8.6 years ago by 11k
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5.0k
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Comment: C: How to know if samtools sort exited normally [left temporary files behind]
8.6 years ago by Sukhi Singh 11k
0
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0
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5.0k
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Comment: C: How to know if samtools sort exited normally [left temporary files behind]
8.6 years ago by Sukhi Singh 11k
0
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0
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5.0k
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Comment: C: How to know if samtools sort exited normally [left temporary files behind]
8.6 years ago by Sukhi Singh 11k
7
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9
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5.0k
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How to know if samtools sort exited normally [left temporary files behind]
ngs ChIP-Seq next-gen samtools
updated 20 months ago by 43k • written 8.6 years ago by 11k
0
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3.1k
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Comment: Comment: Cutadapt list of adapter
updated 20 months ago by 43k • written 8.7 years ago by 11k
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2.9k
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Comment: C: Why there is a long list of unique entries in the current release of Drosophila
8.7 years ago by Sukhi Singh 11k
2
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2
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2.9k
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Blog: Why there is a long list of unique entries in the current release of Drosophila melanogaster r6.06 [flybase]
drosophila ngs ChIP-Seq genome fasta
updated 19 months ago by 43k • written 8.7 years ago by 11k
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11k
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Comment: C: Binning Over Genes And Calculating The Coverage [Bedops/Bedmap]
8.7 years ago by Sukhi Singh 11k
19
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12
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11k
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Binning Over Genes And Calculating The Coverage [Bedops/Bedmap]
ngs chipseq coverage
updated 8.7 years ago by ★ 3.4k • written 11.2 years ago by 11k
1
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1
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4.4k
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Answer: Answer: How to download gc5Base file for hg38?
updated 19 months ago by 43k • written 8.8 years ago by 11k
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2.1k
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Answer: Answer: ChIPQC showed errors 'nnodes' must be >= 1
updated 19 months ago by 43k • written 8.8 years ago by 11k
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0
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4.7k
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Comment: Comment: Extracting The Bibliography Of A Paper Through Pubmed
updated 19 months ago by 43k • written 8.8 years ago by 11k
0
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1
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3.3k
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Comment: Comment: Cufflinks invalid BAM binary header
updated 19 months ago by 43k • written 8.8 years ago by 11k
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0
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1.3k
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Comment: Comment: deploy wwwblast on tomcat?
updated 19 months ago by 43k • written 8.8 years ago by 11k
1
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0
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2.1k
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Answer: Answer: Function in R/File: the most expressed genes.
updated 19 months ago by 43k • written 8.8 years ago by 11k
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0
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2.1k
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Comment: C: Function in R/File: the most expressed genes.
8.8 years ago by Sukhi Singh 11k
0
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1
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1.3k
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Comment: Comment: deploy wwwblast on tomcat?
updated 19 months ago by 43k • written 8.8 years ago by 11k
2
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0
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4.1k
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Answer: Answer: GO Term enrichment prokaryotes
updated 19 months ago by 43k • written 8.8 years ago by 11k
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3.0k
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Answer: Answer: querying 5'UTR, first exon, and flanking sequences
updated 19 months ago by 43k • written 8.8 years ago by 11k
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0
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11k
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Comment: Comment: Merge a bed file to generate non-overlapping entries!
updated 19 months ago by 43k • written 8.8 years ago by 11k
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0
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3.2k
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Comment: C: Determining Transcription Start Sites from multiple RNAseq bioreps
8.8 years ago by Sukhi Singh 11k
3
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1
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3.2k
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Answer: Answer: Determining Transcription Start Sites from multiple RNAseq bioreps
updated 19 months ago by 43k • written 8.8 years ago by 11k
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0
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2.9k
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Comment: C: differential expression analysis tools for single end reads
8.8 years ago by Sukhi Singh 11k
1
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0
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4.1k
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Answer: A: Turning GO Terms to GO IDs
8.8 years ago by Sukhi Singh 11k
0
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2
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11k
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Comment: Comment: Merge a bed file to generate non-overlapping entries!
updated 19 months ago by 43k • written 8.8 years ago by 11k
0
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0
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31k
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Comment: C: NarrowPeak format of ChiP-seq
8.8 years ago by Sukhi Singh 11k
0
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1
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2.9k
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Comment: C: differential expression analysis tools for single end reads
8.8 years ago by Sukhi Singh 11k
0
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1
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11k
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Comment: C: duplicates in bed file
8.8 years ago by Sukhi Singh 11k
0
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1
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3.4k
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Answer: Answer: HOMER tool's HiC interactions
updated 19 months ago by 43k • written 8.8 years ago by 11k
0
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1
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15k
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Comment: C: Rank Normalization of genes in Expression Data
8.8 years ago by Sukhi Singh 11k
3
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1
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2.7k
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Answer: Answer: Functional enrichment in differentially expressed genes from RNA-seq
updated 19 months ago by 43k • written 8.8 years ago by 11k
0
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14k
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Comment: C: Need Script Or Software To Remove Unpaired Reads From Paired End Reads
8.8 years ago by Sukhi Singh 11k
0
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0
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5.2k
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Comment: C: Macs2 And Peak Calling On Chromosome X
8.8 years ago by Sukhi Singh 11k
0
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0
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1.7k
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Comment: Comment: Can we call a protein under undergone ChIP as ChIP'd protein? Is it formal?
updated 18 months ago by 43k • written 8.8 years ago by 11k
0
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0
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1.7k
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Comment: C: Can we call a protein under undergone ChIP as ChIP'd protein? Is it formal?
8.8 years ago by Sukhi Singh 11k
744 results • Page 5 of 15
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