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8
votes
8
replies
12k
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Analyzing digital gene expression data (DGE) from drop-seq pipeline with Seurat.
RNA-Seq R Seurat
updated 4.8 years ago by • 0 • written 6.9 years ago by ▴ 120
2
votes
5
replies
3.3k
views
What to think about when treating scRNA-Seq data as bulk RNA-Seq data
scRNA-seq bulk RNA-seq
updated 6.0 years ago by ▴ 30 • written 6.5 years ago by ▴ 120
0
votes
0
replies
3.3k
views
Comment: C: What to think about when treating scRNA-Seq data as bulk RNA-Seq data
6.5 years ago by chilifan ▴ 120
0
votes
1
reply
1.5k
views
Comment: C: Unexpected genes in mouse DGE (Digital Gene Expression) (gene-cell expression ma
6.5 years ago by chilifan ▴ 120
0
votes
3
replies
1.5k
views
Unexpected genes in mouse DGE (Digital Gene Expression) (gene-cell expression matrix)
Digital Gene Expression genome index drop-seq
6.5 years ago by chilifan ▴ 120
0
votes
0
replies
1.1k
views
Singe cell identification library with Ensembl_ID:s
Ensembl library haplotypes Gene_ID annotation
6.6 years ago by chilifan ▴ 120
4
votes
1
reply
5.9k
views
Principal component analysis: PC2 contribute more to variance than PC1?
PCA principal component analysis seurat
updated 6.7 years ago by ★ 1.4k • written 6.7 years ago by ▴ 120
0
votes
0
replies
5.2k
views
Comment: C: Clusters moving for same dataset and code using tSNE
6.7 years ago by chilifan ▴ 120
5
votes
2
replies
5.2k
views
Clusters moving for same dataset and code using tSNE
tSNE Seurat Clustering scRNAseq
updated 6.7 years ago by 22k • written 6.7 years ago by ▴ 120
0
votes
0
replies
1.3k
views
Chromosome disagreement in drop-seq meta data pipeline
RNA-Seq drop-seq meta data genome indexing
6.7 years ago by chilifan ▴ 120
0
votes
0
replies
2.6k
views
Comment: C: SO:coordinate Error parsing text SAM file. Line: BAM#Pm@HD VN:1.5 SO:coordinate
6.7 years ago by chilifan ▴ 120
0
votes
2
replies
2.6k
views
SO:coordinate Error parsing text SAM file. Line: BAM#Pm@HD VN:1.5 SO:coordinate
drop-seq samtools BAM
updated 2.6 years ago by 45k • written 6.7 years ago by ▴ 120
8
votes
8
replies
3.9k
views
BBDuk.sh and BBDuk2.sh barcodefilter does not filter the reads
BBMap BBDuk barcode illumina index fastq
6.7 years ago by chilifan ▴ 120
0
votes
0
replies
3.9k
views
Comment: A: BBDuk.sh and BBDuk2.sh barcodefilter does not filter the reads
6.7 years ago by chilifan ▴ 120
0
votes
3
replies
3.9k
views
Comment: A: BBDuk.sh and BBDuk2.sh barcodefilter does not filter the reads
6.8 years ago by chilifan ▴ 120
0
votes
0
replies
12k
views
Comment: C: Analyzing digital gene expression data (DGE) from drop-seq pipeline with Seurat.
6.9 years ago by chilifan ▴ 120
4
votes
0
replies
12k
views
Answer: A: Analyzing digital gene expression data (DGE) from drop-seq pipeline with Seurat.
6.9 years ago by chilifan ▴ 120
0
votes
1
reply
12k
views
Comment: A: Analyzing digital gene expression data (DGE) from drop-seq pipeline with Seurat.
6.9 years ago by chilifan ▴ 120
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