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2
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1.2k
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Comment: Comment: STAR mapping - regarding output files content
9 months ago by swbarnes2 14k
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965
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Comment: Comment: RSEM uses different gene lengths for each sample.
9 months ago by swbarnes2 14k
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0
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729
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Comment: Comment: Can I extract a complete sequence of gene from mapped reads bam file
9 months ago by swbarnes2 14k
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1.2k
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Comment: Comment: Is RSEM required for RNA-seq data analysis using STAR and edgeR?
10 months ago by swbarnes2 14k
1
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0
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1.2k
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Comment: Comment: Transcript quantification
11 months ago by swbarnes2 14k
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1.9k
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Comment: Comment: Getting sequences from fastq file using Grep command
11 months ago by swbarnes2 14k
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1.3k
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Comment: Comment: A question about the raw RNA-seq processing workflow
11 months ago by swbarnes2 14k
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1
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1.3k
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Comment: Comment: A question about the raw RNA-seq processing workflow
11 months ago by swbarnes2 14k
0
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0
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1.9k
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Comment: Comment: Counting intronic reads in bulk RNA-seq
11 months ago by swbarnes2 14k
0
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1
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790
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Comment: Comment: Ambient RNA expression correction
11 months ago by swbarnes2 14k
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0
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1.1k
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Comment: Comment: RNAseq Data and Pipeline
11 months ago by swbarnes2 14k
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1.1k
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Comment: Comment: Is there anyway to cancel CPM normalization?
11 months ago by swbarnes2 14k
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0
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1.5k
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Comment: Comment: Single cell chemistry
11 months ago by swbarnes2 14k
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0
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1.5k
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Comment: Comment: Single cell chemistry
11 months ago by swbarnes2 14k
0
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1
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1.5k
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Comment: Comment: Single cell chemistry
11 months ago by swbarnes2 14k
0
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1
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1.5k
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Comment: Comment: Single cell chemistry
11 months ago by swbarnes2 14k
1
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0
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670
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Comment: Comment: Using RNA-seq to detect pathogen sequences in host tissue
12 months ago by swbarnes2 14k
1
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0
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1.4k
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Comment: Comment: On "wings" in volcano plots...
12 months ago by swbarnes2 14k
1
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1
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2.6k
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Comment: Comment: Subsetting DESeq data set to compare treatments within one group (multi-group ex
12 months ago by swbarnes2 14k
0
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0
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862
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Comment: Comment: How to better distribute my replicates between two batches of bulk RNAseq?
12 months ago by swbarnes2 14k
1
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1
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1.1k
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Comment: Comment: t-test to check if the cancer samples are significantly different than the norma
12 months ago by swbarnes2 14k
0
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1
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2.3k
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Comment: Comment: Obtaining TPM values from STAR alignment and counts with featurecounts using R's
12 months ago by swbarnes2 14k
0
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1
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807
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Comment: Comment: Genecount-difference between HT-seq count, RSEM, and Kallisto
12 months ago by swbarnes2 14k
0
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0
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649
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Comment: Comment: mRNA counts
12 months ago by swbarnes2 14k
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0
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1.6k
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Comment: Comment: How can I make all my PCA plots the same shape using ggplots?
13 months ago by swbarnes2 14k
0
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1
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1.1k
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Comment: Comment: Is there anyway to cancel CPM normalization?
13 months ago by swbarnes2 14k
0
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0
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1.4k
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Comment: Comment: DESeq2 multiple conditions, time points and sample types
13 months ago by swbarnes2 14k
2
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863
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Comment: Comment: trimmomatic and STAR alignments
13 months ago by swbarnes2 14k
0
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1
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909
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Comment: Comment: How to tell which exon does a variant located?
13 months ago by swbarnes2 14k
0
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0
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668
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Comment: Comment: HTseq no features
14 months ago by swbarnes2 14k
0
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0
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606
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Comment: Comment: DESeq2
14 months ago by swbarnes2 14k
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0
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822
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Comment: Comment: want the codes for Deseq2 to perform DEGs.
14 months ago by swbarnes2 14k
0
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1
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4.8k
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Comment: Comment: Get TPM from RNA counts and gene length?
15 months ago by swbarnes2 14k
0
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1
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4.8k
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Comment: Comment: Get TPM from RNA counts and gene length?
15 months ago by swbarnes2 14k
0
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1
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785
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Comment: Comment: sRNA seq analysis after trimming adapter
15 months ago by swbarnes2 14k
0
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1
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930
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Comment: Comment: Extract unmapped reads AND reads covering chromosome 6 from a bam file?
15 months ago by swbarnes2 14k
0
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0
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1.0k
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Comment: Comment: What's the absolute easiest way of visualizing stranded RNA-seq data on custom g
15 months ago by swbarnes2 14k
0
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1
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1.0k
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Comment: Comment: What's the absolute easiest way of visualizing stranded RNA-seq data on custom g
15 months ago by swbarnes2 14k
0
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1
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1.0k
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Comment: Comment: What's the absolute easiest way of visualizing stranded RNA-seq data on custom g
15 months ago by swbarnes2 14k
1
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0
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1.7k
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Comment: Comment: Mapped reads not mapping to a real sequence?
15 months ago by swbarnes2 14k
2
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2
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1.3k
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Comment: Comment: Question about RNA-Seq data alignment
updated 15 months ago by 82k • written 15 months ago by 14k
0
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1
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1.7k
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Comment: Comment: Mapped reads not mapping to a real sequence?
15 months ago by swbarnes2 14k
1
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0
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1.6k
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Comment: Comment: RNAseq for DE purpose
15 months ago by swbarnes2 14k
2
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0
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619
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Comment: Comment: Analyzing bulk RNA-seq
15 months ago by swbarnes2 14k
1
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1
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1.2k
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Comment: Comment: How to change every third line in a fastq library
15 months ago by swbarnes2 14k
0
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0
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663
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Comment: Comment: Can´t acces Biomart via R anymore
16 months ago by swbarnes2 14k
1
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0
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1.5k
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Comment: Comment: How to configure a data set with mouse data to one with human gene names using a
16 months ago by swbarnes2 14k
0
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1
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1.6k
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Comment: Comment: how to get fastq file from cellranger?
17 months ago by swbarnes2 14k
0
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1
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1.6k
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Comment: Comment: how to get fastq file from cellranger?
17 months ago by swbarnes2 14k
1
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2
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930
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Comment: Comment: drawing Venn graph
17 months ago by swbarnes2 14k
1,028 results • Page 2 of 21
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